Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ST13P14-201ENST00000474095 734 ntBASIC1.07□□□□□ -2.24
USH2AO75445 MTCYBP28-201ENST00000566728 1132 ntBASIC1.07□□□□□ -2.24
USH2AO75445 AC015813.4-201ENST00000610469 179 ntBASIC1.07□□□□□ -2.24
USH2AO75445 AC017007.4-201ENST00000503353 1352 ntBASIC1.07□□□□□ -2.24
USH2AO75445 AP000526.1-201ENST00000603308 1388 ntBASIC1.07□□□□□ -2.24
USH2AO75445 AC011978.2-201ENST00000569835 2054 ntBASIC1.07□□□□□ -2.24
USH2AO75445 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.07□□□□□ -2.24
USH2AO75445 AL139156.1-201ENST00000412785 841 ntBASIC1.07□□□□□ -2.24
USH2AO75445 YPEL5P1-201ENST00000419731 367 ntBASIC1.07□□□□□ -2.24
USH2AO75445 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.07□□□□□ -2.24
USH2AO75445 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.07□□□□□ -2.24
USH2AO75445 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
USH2AO75445 RNA5SP154-201ENST00000516193 111 ntBASIC1.07□□□□□ -2.24
USH2AO75445 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC1.07□□□□□ -2.24
USH2AO75445 OR5D17P-201ENST00000531492 978 ntBASIC1.07□□□□□ -2.24
USH2AO75445 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC1.07□□□□□ -2.24
USH2AO75445 AL589994.2-201ENST00000621124 579 ntBASIC1.07□□□□□ -2.24
USH2AO75445 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.07□□□□□ -2.24
USH2AO75445 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.07□□□□□ -2.24
USH2AO75445 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.07□□□□□ -2.24
USH2AO75445 AP000275.1-201ENST00000411943 390 ntBASIC1.07□□□□□ -2.24
USH2AO75445 AC025445.1-201ENST00000502728 300 ntBASIC1.07□□□□□ -2.24
USH2AO75445 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.07□□□□□ -2.24
USH2AO75445 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.07□□□□□ -2.24
USH2AO75445 AC131238.1-201ENST00000617135 328 ntBASIC1.07□□□□□ -2.24
USH2AO75445 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
USH2AO75445 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
USH2AO75445 Z73965.1-201ENST00000623412 2297 ntBASIC1.07□□□□□ -2.24
USH2AO75445 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.07□□□□□ -2.24
USH2AO75445 AL365396.1-201ENST00000430854 671 ntBASIC1.07□□□□□ -2.24
USH2AO75445 RPL23AP76-201ENST00000441860 458 ntBASIC1.07□□□□□ -2.24
USH2AO75445 AC107222.1-201ENST00000510899 637 ntBASIC1.07□□□□□ -2.24
USH2AO75445 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC1.07□□□□□ -2.24
USH2AO75445 RNA5SP217-201ENST00000515959 91 ntBASIC1.07□□□□□ -2.24
USH2AO75445 RNA5SP337-201ENST00000517007 109 ntBASIC1.07□□□□□ -2.24
USH2AO75445 AP005660.1-201ENST00000522972 293 ntBASIC1.07□□□□□ -2.24
USH2AO75445 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC1.07□□□□□ -2.24
USH2AO75445 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.07□□□□□ -2.24
USH2AO75445 AC135628.1-201ENST00000568867 534 ntBASIC1.07□□□□□ -2.24
USH2AO75445 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.07□□□□□ -2.24
USH2AO75445 AP005262.1-201ENST00000582646 997 ntBASIC1.07□□□□□ -2.24
USH2AO75445 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.07□□□□□ -2.24
USH2AO75445 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
USH2AO75445 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
USH2AO75445 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.06□□□□□ -2.24
USH2AO75445 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
USH2AO75445 RN7SKP247-201ENST00000411094 308 ntBASIC1.06□□□□□ -2.24
USH2AO75445 RPS12P5-201ENST00000423449 371 ntBASIC1.06□□□□□ -2.24
USH2AO75445 RN7SKP49-201ENST00000516675 260 ntBASIC1.06□□□□□ -2.24
USH2AO75445 AC022634.1-201ENST00000520765 532 ntBASIC1.06□□□□□ -2.24
USH2AO75445 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC1.06□□□□□ -2.24
USH2AO75445 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.06□□□□□ -2.24
USH2AO75445 ARL2BPP2-201ENST00000550907 489 ntBASIC1.06□□□□□ -2.24
USH2AO75445 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
USH2AO75445 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC1.06□□□□□ -2.24
USH2AO75445 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.06□□□□□ -2.24
USH2AO75445 AC244517.3-201ENST00000616254 1235 ntBASIC1.06□□□□□ -2.24
USH2AO75445 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
USH2AO75445 KPNA2P1-201ENST00000458289 1591 ntBASIC1.06□□□□□ -2.24
USH2AO75445 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
USH2AO75445 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
USH2AO75445 Y_RNA.393-201ENST00000383936 102 ntBASIC1.06□□□□□ -2.24
USH2AO75445 AC069218.2-201ENST00000411665 344 ntBASIC1.06□□□□□ -2.24
USH2AO75445 AC006960.1-201ENST00000419980 153 ntBASIC1.06□□□□□ -2.24
USH2AO75445 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
USH2AO75445 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC1.06□□□□□ -2.24
USH2AO75445 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
USH2AO75445 FABP5P13-201ENST00000452144 328 ntBASIC1.06□□□□□ -2.24
USH2AO75445 RN7SL633P-201ENST00000488974 297 ntBASIC1.06□□□□□ -2.24
USH2AO75445 AC034244.1-201ENST00000507687 207 ntBASIC1.06□□□□□ -2.24
USH2AO75445 HNRNPKP5-201ENST00000515300 253 ntBASIC1.06□□□□□ -2.24
USH2AO75445 snoZ278.1-201ENST00000517059 112 ntBASIC1.06□□□□□ -2.24
USH2AO75445 IGKV2D-23-201ENST00000518179 286 ntBASIC1.06□□□□□ -2.24
USH2AO75445 AC004825.2-201ENST00000616634 455 ntBASIC1.06□□□□□ -2.24
USH2AO75445 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
USH2AO75445 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
USH2AO75445 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC1.06□□□□□ -2.24
USH2AO75445 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
USH2AO75445 NPM1P38-201ENST00000403835 865 ntBASIC1.06□□□□□ -2.24
USH2AO75445 RNU4-62P-201ENST00000410125 130 ntBASIC1.06□□□□□ -2.24
USH2AO75445 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.06□□□□□ -2.24
USH2AO75445 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.06□□□□□ -2.24
USH2AO75445 RPS7P2-201ENST00000435134 607 ntBASIC1.06□□□□□ -2.24
USH2AO75445 DYNLL1P5-201ENST00000467158 270 ntBASIC1.06□□□□□ -2.24
USH2AO75445 SYT14P1-201ENST00000481459 721 ntBASIC1.06□□□□□ -2.24
USH2AO75445 CCNHP1-201ENST00000513311 678 ntBASIC1.06□□□□□ -2.24
USH2AO75445 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.06□□□□□ -2.24
USH2AO75445 CR381653.2-201ENST00000624041 768 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms