Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VAMP4O75379 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VAMP4O75379 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VAMP4O75379 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAMP4O75379 AC092079.1-201ENST00000558620 1985 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VAMP4O75379 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VAMP4O75379 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VAMP4O75379 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VAMP4O75379 Y_RNA.38-201ENST00000362617 102 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 Y_RNA.89-201ENST00000363031 102 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 Y_RNA.813-201ENST00000364639 102 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 RNY4P34-201ENST00000364779 95 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 RNA5SP366-201ENST00000365454 123 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.54□□□□□ -1.52
VAMP4O75379 AC068538.1-201ENST00000376856 336 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 RNA5SP372-201ENST00000390836 115 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 RNU6-876P-201ENST00000391295 104 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.54□□□□□ -1.52
VAMP4O75379 AL358934.1-201ENST00000432346 324 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.54□□□□□ -1.52
VAMP4O75379 ABCF2P2-201ENST00000450549 296 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 RNU6-1218P-201ENST00000458990 108 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 AC026979.1-201ENST00000492525 396 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 CEACAMP10-202ENST00000495431 496 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 AC008628.2-201ENST00000502605 298 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 RNA5SP73-201ENST00000516744 108 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VAMP4O75379 CENPUP2-201ENST00000555897 1186 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.54□□□□□ -1.52
VAMP4O75379 CKS1BP3-201ENST00000600888 237 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 AC245014.2-201ENST00000603689 287 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 AC246785.4-201ENST00000605374 287 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 AL355816.1-201ENST00000607951 118 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 AC116447.1-201ENST00000613153 453 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 MIR6810-201ENST00000622701 70 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 AC110994.2-201ENST00000635481 492 ntBASIC5.54□□□□□ -1.52
VAMP4O75379 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
VAMP4O75379 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
VAMP4O75379 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VAMP4O75379 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VAMP4O75379 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VAMP4O75379 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VAMP4O75379 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VAMP4O75379 RNU6-984P-201ENST00000363236 109 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 RNU6-289P-201ENST00000364093 107 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VAMP4O75379 RNU6-952P-201ENST00000391164 108 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 AL133384.1-201ENST00000412744 351 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 AC011933.1-201ENST00000413334 321 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 TPMTP2-201ENST00000414372 726 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 SPA17P1-201ENST00000416656 452 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.53□□□□□ -1.52
VAMP4O75379 MTCO1P20-201ENST00000425366 358 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.53□□□□□ -1.52
VAMP4O75379 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.53□□□□□ -1.52
VAMP4O75379 RSU1P2-202ENST00000437884 485 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.53□□□□□ -1.52
VAMP4O75379 AC092013.1-201ENST00000438795 332 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 USP9YP8-201ENST00000441913 500 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.53□□□□□ -1.52
VAMP4O75379 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.53□□□□□ -1.52
VAMP4O75379 MTCO3P20-201ENST00000454926 688 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.53□□□□□ -1.52
VAMP4O75379 AC116533.1-201ENST00000459748 321 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 RPL38P1-201ENST00000460914 211 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.53□□□□□ -1.52
VAMP4O75379 RPL31P50-201ENST00000471002 296 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
VAMP4O75379 AC012158.1-204ENST00000483430 465 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.53□□□□□ -1.52
VAMP4O75379 AC104164.2-201ENST00000496953 495 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 TMEM251P1-201ENST00000503717 318 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 AC006390.1-201ENST00000508068 283 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.53□□□□□ -1.52
VAMP4O75379 AC008958.1-201ENST00000511047 682 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.53□□□□□ -1.52
VAMP4O75379 RNU6-875P-201ENST00000516488 106 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 AC104986.1-201ENST00000517978 436 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.53□□□□□ -1.52
VAMP4O75379 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.53□□□□□ -1.52
VAMP4O75379 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.53□□□□□ -1.52
VAMP4O75379 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VAMP4O75379 AP003117.2-201ENST00000606010 545 ntBASIC5.53□□□□□ -1.52
VAMP4O75379 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VAMP4O75379 Y_RNA.804-201ENST00000615262 101 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms