Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CTNND1O60716 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CTNND1O60716 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNND1O60716 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNND1O60716 RNU6-28P-201ENST00000362378 107 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 Y_RNA.436-201ENST00000384097 102 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 RNU6-356P-201ENST00000384140 107 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 MIR200C-201ENST00000384980 68 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.82□□□□□ -1.64
CTNND1O60716 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.82□□□□□ -1.64
CTNND1O60716 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNND1O60716 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNND1O60716 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTNND1O60716 RPS27AP14-201ENST00000422868 454 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNND1O60716 AL500522.2-201ENST00000448562 343 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 RPL5P30-201ENST00000465511 891 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 TMEM248P1-201ENST00000510579 951 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 AC034159.1-201ENST00000513885 583 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNND1O60716 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.82□□□□□ -1.64
CTNND1O60716 AC013828.2-201ENST00000532487 235 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.82□□□□□ -1.64
CTNND1O60716 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNND1O60716 AP000403.1-201ENST00000603349 851 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 AC084782.3-201ENST00000612282 578 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 AC009237.17-201ENST00000618111 748 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.82□□□□□ -1.64
CTNND1O60716 AC012442.3-202ENST00000636742 206 ntBASIC4.82□□□□□ -1.64
CTNND1O60716 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CTNND1O60716 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNND1O60716 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTNND1O60716 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTNND1O60716 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTNND1O60716 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNND1O60716 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNND1O60716 OR11H5P-202ENST00000641612 1325 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTNND1O60716 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNND1O60716 RNU5F-7P-201ENST00000363696 115 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 RNU6-343P-201ENST00000364709 104 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 AL355379.1-201ENST00000405542 640 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 RNU2-15P-201ENST00000410692 191 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.81□□□□□ -1.64
CTNND1O60716 AC109780.2-201ENST00000413467 845 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 RPS12P23-201ENST00000419579 400 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 AC007742.1-201ENST00000425789 329 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNND1O60716 CKS1BP5-201ENST00000434172 273 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNND1O60716 RPL37P21-201ENST00000435890 276 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 ELOCP26-201ENST00000436067 329 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.81□□□□□ -1.64
CTNND1O60716 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNND1O60716 HMGB1P15-201ENST00000453854 435 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNND1O60716 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNND1O60716 RN7SKP116-201ENST00000516902 319 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 RPL12P22-201ENST00000519073 490 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNND1O60716 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNND1O60716 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.81□□□□□ -1.64
CTNND1O60716 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNND1O60716 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.81□□□□□ -1.64
CTNND1O60716 AC091489.2-201ENST00000566263 604 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 MIR544B-201ENST00000582372 78 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.81□□□□□ -1.64
CTNND1O60716 AC119751.7-201ENST00000600494 245 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 AL592436.1-201ENST00000605135 558 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 AC128687.1-201ENST00000605304 619 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 MIR7154-201ENST00000620673 73 ntBASIC4.81□□□□□ -1.64
CTNND1O60716 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNND1O60716 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNND1O60716 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNND1O60716 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.81□□□□□ -1.64
CTNND1O60716 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNND1O60716 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTNND1O60716 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTNND1O60716 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.8□□□□□ -1.64
CTNND1O60716 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTNND1O60716 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
CTNND1O60716 OR52B1P-201ENST00000316506 909 ntBASIC4.8□□□□□ -1.64
CTNND1O60716 SNORA71.3-201ENST00000362582 128 ntBASIC4.8□□□□□ -1.64
CTNND1O60716 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.8□□□□□ -1.64
CTNND1O60716 RNU4-24P-201ENST00000364565 139 ntBASIC4.8□□□□□ -1.64
CTNND1O60716 RNU6-761P-201ENST00000384148 107 ntBASIC4.8□□□□□ -1.64
CTNND1O60716 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CTNND1O60716 U3.29-201ENST00000391296 212 ntBASIC4.8□□□□□ -1.64
CTNND1O60716 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTNND1O60716 OR5BE1P-201ENST00000425977 939 ntBASIC4.8□□□□□ -1.64
CTNND1O60716 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.8□□□□□ -1.64
CTNND1O60716 SDCBPP1-201ENST00000440192 890 ntBASIC4.8□□□□□ -1.64
CTNND1O60716 RPS4XP4-201ENST00000443195 763 ntBASIC4.8□□□□□ -1.64
CTNND1O60716 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.8□□□□□ -1.64
CTNND1O60716 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CTNND1O60716 MTCO2P7-201ENST00000446518 666 ntBASIC4.8□□□□□ -1.64
CTNND1O60716 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms