Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.74□□□□□ -1.49
GRIN3BO60391 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GRIN3BO60391 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GRIN3BO60391 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
GRIN3BO60391 AL161912.2-201ENST00000565707 3007 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
GRIN3BO60391 Y_RNA.159-201ENST00000363674 87 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 RNU6-282P-201ENST00000365357 103 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 RNU6-744P-201ENST00000365557 107 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GRIN3BO60391 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
GRIN3BO60391 RNU6-1316P-201ENST00000384242 108 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 Y_RNA.509-201ENST00000384506 99 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 RNA5SP118-201ENST00000410385 109 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 MTCO2P5-201ENST00000422621 426 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.74□□□□□ -1.49
GRIN3BO60391 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.74□□□□□ -1.49
GRIN3BO60391 SNRPGP6-201ENST00000451124 220 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.74□□□□□ -1.49
GRIN3BO60391 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.74□□□□□ -1.49
GRIN3BO60391 RPL36AP51-201ENST00000487216 318 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 RPL36AP41-201ENST00000493820 306 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GRIN3BO60391 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.74□□□□□ -1.49
GRIN3BO60391 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.74□□□□□ -1.49
GRIN3BO60391 snoU109.6-201ENST00000516831 118 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.74□□□□□ -1.49
GRIN3BO60391 AC123904.3-201ENST00000547218 814 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.74□□□□□ -1.49
GRIN3BO60391 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.74□□□□□ -1.49
GRIN3BO60391 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GRIN3BO60391 SNORA74C-1-201ENST00000580726 201 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 PSMA6P4-201ENST00000603247 718 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 AC012468.1-201ENST00000604888 430 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.74□□□□□ -1.49
GRIN3BO60391 AC009159.1-201ENST00000618386 642 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 AC039056.2-201ENST00000622261 511 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 CR392039.5-201ENST00000623201 510 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.74□□□□□ -1.49
GRIN3BO60391 AC010149.2-201ENST00000637608 315 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.74□□□□□ -1.49
GRIN3BO60391 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.74□□□□□ -1.49
GRIN3BO60391 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.74□□□□□ -1.49
GRIN3BO60391 AP000473.2-201ENST00000602659 1537 ntBASIC5.74□□□□□ -1.49
GRIN3BO60391 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GRIN3BO60391 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GRIN3BO60391 AC027228.2-201ENST00000567141 2154 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GRIN3BO60391 AC092447.10-201ENST00000620607 1652 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 AC024560.2-201ENST00000507981 1497 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
GRIN3BO60391 RNU6-249P-201ENST00000363016 102 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 RNU1-39P-201ENST00000383897 165 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 RNA5SP241-201ENST00000391326 114 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 SDHCP2-201ENST00000398565 501 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.73□□□□□ -1.49
GRIN3BO60391 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.73□□□□□ -1.49
GRIN3BO60391 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.73□□□□□ -1.49
GRIN3BO60391 AL353193.1-201ENST00000421444 268 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.73□□□□□ -1.49
GRIN3BO60391 AL136231.1-201ENST00000429407 730 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 GOT2P5-201ENST00000433995 546 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.73□□□□□ -1.49
GRIN3BO60391 AC093019.1-201ENST00000443135 252 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 AL354710.1-201ENST00000453641 246 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.73□□□□□ -1.49
GRIN3BO60391 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.73□□□□□ -1.49
GRIN3BO60391 Y_RNA.719-201ENST00000517156 106 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.73□□□□□ -1.49
GRIN3BO60391 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.73□□□□□ -1.49
GRIN3BO60391 AC027369.5-201ENST00000533838 755 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.73□□□□□ -1.49
GRIN3BO60391 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.73□□□□□ -1.49
GRIN3BO60391 AC099489.2-201ENST00000574976 260 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 AC053481.4-201ENST00000583164 216 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 RN7SL435P-201ENST00000584418 282 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 AC044792.1-201ENST00000593294 196 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 BNIP3P10-201ENST00000605360 577 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.73□□□□□ -1.49
GRIN3BO60391 AC010338.1-201ENST00000621823 717 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.73□□□□□ -1.49
GRIN3BO60391 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GRIN3BO60391 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
GRIN3BO60391 AL118496.1-201ENST00000440201 1812 ntBASIC5.73□□□□□ -1.49
GRIN3BO60391 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.73□□□□□ -1.49
GRIN3BO60391 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.73□□□□□ -1.49
GRIN3BO60391 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.72□□□□□ -1.49
GRIN3BO60391 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GRIN3BO60391 KPNA2P2-201ENST00000419546 1489 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GRIN3BO60391 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
GRIN3BO60391 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GRIN3BO60391 FRG1BP-201ENST00000278882 761 ntBASIC5.72□□□□□ -1.49
GRIN3BO60391 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms