Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
URB1O60287 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
URB1O60287 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
URB1O60287 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
URB1O60287 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
URB1O60287 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
URB1O60287 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.22□□□□□ -2.05
URB1O60287 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
URB1O60287 EIF2S2P4-201ENST00000461070 984 ntBASIC2.22□□□□□ -2.05
URB1O60287 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.22□□□□□ -2.05
URB1O60287 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.22□□□□□ -2.05
URB1O60287 SNRPGP18-201ENST00000553000 214 ntBASIC2.22□□□□□ -2.05
URB1O60287 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.22□□□□□ -2.05
URB1O60287 AL592437.2-201ENST00000421655 2434 ntBASIC2.22□□□□□ -2.05
URB1O60287 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
URB1O60287 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
URB1O60287 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
URB1O60287 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
URB1O60287 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
URB1O60287 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
URB1O60287 AL023284.1-201ENST00000403956 276 ntBASIC2.21□□□□□ -2.06
URB1O60287 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.21□□□□□ -2.06
URB1O60287 AC009969.1-201ENST00000438726 172 ntBASIC2.21□□□□□ -2.06
URB1O60287 AC245517.4-201ENST00000448601 281 ntBASIC2.21□□□□□ -2.06
URB1O60287 AL024509.2-201ENST00000493462 493 ntBASIC2.21□□□□□ -2.06
URB1O60287 AC106872.3-201ENST00000495104 446 ntBASIC2.21□□□□□ -2.06
URB1O60287 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.21□□□□□ -2.06
URB1O60287 KCTD9P5-201ENST00000504141 1170 ntBASIC2.21□□□□□ -2.06
URB1O60287 SNORA31.1-201ENST00000515993 133 ntBASIC2.21□□□□□ -2.06
URB1O60287 SNORA31.5-201ENST00000516190 133 ntBASIC2.21□□□□□ -2.06
URB1O60287 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.21□□□□□ -2.06
URB1O60287 AC091515.1-201ENST00000548110 679 ntBASIC2.21□□□□□ -2.06
URB1O60287 AC122134.1-201ENST00000565664 1104 ntBASIC2.21□□□□□ -2.06
URB1O60287 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.21□□□□□ -2.06
URB1O60287 AL020991.1-201ENST00000612314 373 ntBASIC2.21□□□□□ -2.06
URB1O60287 MIR6715B-201ENST00000637172 77 ntBASIC2.21□□□□□ -2.06
URB1O60287 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
URB1O60287 PNPT1P2-201ENST00000456768 2050 ntBASIC2.21□□□□□ -2.06
URB1O60287 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.21□□□□□ -2.06
URB1O60287 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
URB1O60287 SNORA25.9-201ENST00000365087 128 ntBASIC2.21□□□□□ -2.06
URB1O60287 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.21□□□□□ -2.06
URB1O60287 RNU6-178P-201ENST00000384631 104 ntBASIC2.21□□□□□ -2.06
URB1O60287 AC080125.1-201ENST00000414888 684 ntBASIC2.21□□□□□ -2.06
URB1O60287 AL353729.1-201ENST00000425044 720 ntBASIC2.21□□□□□ -2.06
URB1O60287 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
URB1O60287 AC093278.1-201ENST00000494700 600 ntBASIC2.21□□□□□ -2.06
URB1O60287 AC068305.1-201ENST00000497406 726 ntBASIC2.21□□□□□ -2.06
URB1O60287 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.21□□□□□ -2.06
URB1O60287 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
URB1O60287 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
URB1O60287 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
URB1O60287 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
URB1O60287 RPS15AP6-201ENST00000420703 385 ntBASIC2.2□□□□□ -2.06
URB1O60287 CYCSP49-201ENST00000420810 319 ntBASIC2.2□□□□□ -2.06
URB1O60287 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.2□□□□□ -2.06
URB1O60287 RPS24P8-201ENST00000431490 402 ntBASIC2.2□□□□□ -2.06
URB1O60287 AC010881.1-201ENST00000433830 235 ntBASIC2.2□□□□□ -2.06
URB1O60287 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
URB1O60287 MTCO3P11-201ENST00000455103 774 ntBASIC2.2□□□□□ -2.06
URB1O60287 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
URB1O60287 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.2□□□□□ -2.06
URB1O60287 AC010198.2-201ENST00000550612 259 ntBASIC2.2□□□□□ -2.06
URB1O60287 CD24P2-201ENST00000565486 219 ntBASIC2.2□□□□□ -2.06
URB1O60287 AC010620.2-201ENST00000600135 313 ntBASIC2.2□□□□□ -2.06
URB1O60287 AC103710.2-201ENST00000609912 942 ntBASIC2.2□□□□□ -2.06
URB1O60287 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.2□□□□□ -2.06
URB1O60287 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.2□□□□□ -2.06
URB1O60287 AC245100.2-201ENST00000454544 1679 ntBASIC2.2□□□□□ -2.06
URB1O60287 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.2□□□□□ -2.06
URB1O60287 MIR518E-201ENST00000385252 88 ntBASIC2.2□□□□□ -2.06
URB1O60287 AL009174.1-201ENST00000426577 416 ntBASIC2.2□□□□□ -2.06
URB1O60287 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC2.2□□□□□ -2.06
URB1O60287 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.2□□□□□ -2.06
URB1O60287 AC135999.1-201ENST00000478962 479 ntBASIC2.2□□□□□ -2.06
URB1O60287 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.2□□□□□ -2.06
URB1O60287 MIR5092-201ENST00000583139 88 ntBASIC2.2□□□□□ -2.06
URB1O60287 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.2□□□□□ -2.06
URB1O60287 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
URB1O60287 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
URB1O60287 RNA5SP239-201ENST00000410218 129 ntBASIC2.19□□□□□ -2.06
URB1O60287 MTCO2P17-201ENST00000424336 677 ntBASIC2.19□□□□□ -2.06
URB1O60287 TAF9P1-201ENST00000445421 515 ntBASIC2.19□□□□□ -2.06
URB1O60287 TAF9P2-201ENST00000454958 515 ntBASIC2.19□□□□□ -2.06
URB1O60287 AP000893.1-201ENST00000474462 794 ntBASIC2.19□□□□□ -2.06
URB1O60287 RNU6-295P-201ENST00000516901 104 ntBASIC2.19□□□□□ -2.06
URB1O60287 VTA1P2-201ENST00000520205 911 ntBASIC2.19□□□□□ -2.06
URB1O60287 AL845331.3-202ENST00000562856 261 ntBASIC2.19□□□□□ -2.06
URB1O60287 AC135628.1-201ENST00000568867 534 ntBASIC2.19□□□□□ -2.06
URB1O60287 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.19□□□□□ -2.06
URB1O60287 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
URB1O60287 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
URB1O60287 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.19□□□□□ -2.06
URB1O60287 EXOC5P1-201ENST00000510543 1969 ntBASIC2.19□□□□□ -2.06
URB1O60287 AL359893.1-201ENST00000447628 1580 ntBASIC2.19□□□□□ -2.06
URB1O60287 AC093831.2-201ENST00000624393 3427 ntBASIC2.19□□□□□ -2.06
URB1O60287 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
URB1O60287 SNORD6-201ENST00000365444 73 ntBASIC2.19□□□□□ -2.06
URB1O60287 AL357520.1-201ENST00000441557 453 ntBASIC2.19□□□□□ -2.06
URB1O60287 RPL23AP14-201ENST00000468281 468 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms