Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 GLULP6-201ENST00000399502 913 ntBASIC4.43□□□□□ -1.7
PROM1O43490 MTND4LP20-201ENST00000402379 270 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AL023807.1-201ENST00000407932 359 ntBASIC4.43□□□□□ -1.7
PROM1O43490 RN7SKP267-201ENST00000410381 285 ntBASIC4.43□□□□□ -1.7
PROM1O43490 MTCO1P17-201ENST00000411522 491 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.43□□□□□ -1.7
PROM1O43490 EIF4EP1-201ENST00000422311 642 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AL445669.1-201ENST00000426743 755 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.43□□□□□ -1.7
PROM1O43490 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.43□□□□□ -1.7
PROM1O43490 AC016831.4-201ENST00000438302 307 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.43□□□□□ -1.7
PROM1O43490 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.43□□□□□ -1.7
PROM1O43490 DPPA3P1-201ENST00000448050 469 ntBASIC4.43□□□□□ -1.7
PROM1O43490 BX322784.1-201ENST00000455793 1077 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.43□□□□□ -1.7
PROM1O43490 S100A11P1-201ENST00000477525 312 ntBASIC4.43□□□□□ -1.7
PROM1O43490 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AC069439.1-201ENST00000494739 167 ntBASIC4.43□□□□□ -1.7
PROM1O43490 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
PROM1O43490 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.43□□□□□ -1.7
PROM1O43490 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.43□□□□□ -1.7
PROM1O43490 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.43□□□□□ -1.7
PROM1O43490 AC104986.1-201ENST00000517978 436 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AP001893.2-201ENST00000526949 202 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AP001646.1-201ENST00000527936 915 ntBASIC4.43□□□□□ -1.7
PROM1O43490 FAM92A1P1-201ENST00000528023 890 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.43□□□□□ -1.7
PROM1O43490 CYCSP28-201ENST00000534284 321 ntBASIC4.43□□□□□ -1.7
PROM1O43490 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.43□□□□□ -1.7
PROM1O43490 LSM6P2-201ENST00000552208 177 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.43□□□□□ -1.7
PROM1O43490 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.43□□□□□ -1.7
PROM1O43490 HSPE1P3-201ENST00000559254 309 ntBASIC4.43□□□□□ -1.7
PROM1O43490 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.43□□□□□ -1.7
PROM1O43490 ATP5J2P6-201ENST00000565203 266 ntBASIC4.43□□□□□ -1.7
PROM1O43490 MIR4284-201ENST00000578924 81 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AP005119.2-201ENST00000579735 1105 ntBASIC4.43□□□□□ -1.7
PROM1O43490 HMGN1P30-201ENST00000589286 268 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
PROM1O43490 Y_RNA.804-201ENST00000615262 101 ntBASIC4.43□□□□□ -1.7
PROM1O43490 MLECP1-201ENST00000615893 709 ntBASIC4.43□□□□□ -1.7
PROM1O43490 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.43□□□□□ -1.7
PROM1O43490 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.43□□□□□ -1.7
PROM1O43490 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PROM1O43490 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PROM1O43490 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.43□□□□□ -1.7
PROM1O43490 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PROM1O43490 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PROM1O43490 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PROM1O43490 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PROM1O43490 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.43□□□□□ -1.7
PROM1O43490 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PROM1O43490 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.42□□□□□ -1.7
PROM1O43490 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PROM1O43490 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PROM1O43490 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PROM1O43490 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PROM1O43490 RPL23AP57-201ENST00000332361 466 ntBASIC4.42□□□□□ -1.7
PROM1O43490 U8.3-201ENST00000363321 132 ntBASIC4.42□□□□□ -1.7
PROM1O43490 RNY4P14-201ENST00000363656 96 ntBASIC4.42□□□□□ -1.7
PROM1O43490 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PROM1O43490 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PROM1O43490 AL031679.1-201ENST00000400616 525 ntBASIC4.42□□□□□ -1.7
PROM1O43490 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.42□□□□□ -1.7
PROM1O43490 RN7SKP285-201ENST00000410137 318 ntBASIC4.42□□□□□ -1.7
PROM1O43490 AC140479.3-201ENST00000418944 1126 ntBASIC4.42□□□□□ -1.7
PROM1O43490 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
PROM1O43490 AC008065.1-201ENST00000428525 348 ntBASIC4.42□□□□□ -1.7
PROM1O43490 TIMM9P3-201ENST00000428659 274 ntBASIC4.42□□□□□ -1.7
PROM1O43490 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.42□□□□□ -1.7
PROM1O43490 AC009961.2-201ENST00000435771 251 ntBASIC4.42□□□□□ -1.7
PROM1O43490 MTCO3P18-201ENST00000440206 761 ntBASIC4.42□□□□□ -1.7
PROM1O43490 RPS4XP4-201ENST00000443195 763 ntBASIC4.42□□□□□ -1.7
PROM1O43490 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.42□□□□□ -1.7
PROM1O43490 AL645939.1-201ENST00000453429 797 ntBASIC4.42□□□□□ -1.7
PROM1O43490 RPS23P7-201ENST00000466210 444 ntBASIC4.42□□□□□ -1.7
PROM1O43490 AC041039.1-201ENST00000485656 536 ntBASIC4.42□□□□□ -1.7
PROM1O43490 HMGB1P36-201ENST00000487709 576 ntBASIC4.42□□□□□ -1.7
PROM1O43490 AC013356.1-201ENST00000489027 564 ntBASIC4.42□□□□□ -1.7
PROM1O43490 AC011005.3-201ENST00000491624 395 ntBASIC4.42□□□□□ -1.7
PROM1O43490 AC019235.1-201ENST00000503847 207 ntBASIC4.42□□□□□ -1.7
PROM1O43490 AC006390.1-201ENST00000508068 283 ntBASIC4.42□□□□□ -1.7
PROM1O43490 AC117522.1-201ENST00000509821 380 ntBASIC4.42□□□□□ -1.7
PROM1O43490 SAP18P1-201ENST00000512058 390 ntBASIC4.42□□□□□ -1.7
PROM1O43490 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
PROM1O43490 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.42□□□□□ -1.7
PROM1O43490 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.42□□□□□ -1.7
PROM1O43490 ZNF705CP-201ENST00000530515 889 ntBASIC4.42□□□□□ -1.7
PROM1O43490 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.42□□□□□ -1.7
PROM1O43490 AL110118.1-201ENST00000553543 400 ntBASIC4.42□□□□□ -1.7
PROM1O43490 PARP1P2-201ENST00000556806 195 ntBASIC4.42□□□□□ -1.7
PROM1O43490 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.42□□□□□ -1.7
PROM1O43490 AC105129.1-201ENST00000560250 297 ntBASIC4.42□□□□□ -1.7
PROM1O43490 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.42□□□□□ -1.7
PROM1O43490 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.42□□□□□ -1.7
PROM1O43490 A2MP1-204ENST00000566278 4130 ntBASIC4.42□□□□□ -1.7
PROM1O43490 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.42□□□□□ -1.7
PROM1O43490 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.42□□□□□ -1.7
PROM1O43490 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms