Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 AC087369.1-201ENST00000520775 996 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 SUMO2P20-201ENST00000520803 283 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRTM2O43300 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRTM2O43300 PDCL2P2-201ENST00000533651 189 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRTM2O43300 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRTM2O43300 AC006960.3-201ENST00000561845 705 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRTM2O43300 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRRTM2O43300 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRTM2O43300 BNIP3P38-201ENST00000601117 544 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AL445435.1-201ENST00000604232 665 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 RNVU1-4-201ENST00000612985 164 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRTM2O43300 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
LRRTM2O43300 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRTM2O43300 AC092628.2-201ENST00000622492 339 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
LRRTM2O43300 AC021755.1-201ENST00000559747 1447 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRRTM2O43300 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
LRRTM2O43300 AP005901.5-201ENST00000545779 1796 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRRTM2O43300 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRRTM2O43300 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRTM2O43300 PWAR6-201ENST00000552334 4618 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRTM2O43300 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRTM2O43300 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRTM2O43300 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRTM2O43300 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRTM2O43300 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRTM2O43300 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LRRTM2O43300 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRTM2O43300 RNU6-263P-201ENST00000363811 107 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 snoZ40.1-201ENST00000364540 72 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LRRTM2O43300 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
LRRTM2O43300 AL391417.1-201ENST00000404100 426 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AL583834.1-201ENST00000406943 343 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AL139098.1-201ENST00000407291 389 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 SSR1P2-201ENST00000415208 787 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRTM2O43300 AL049610.1-201ENST00000423374 372 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 RPF2P1-201ENST00000424137 906 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 RPL7P44-201ENST00000424827 742 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRTM2O43300 USP9YP24-201ENST00000434374 697 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRTM2O43300 HMGN2P20-201ENST00000437531 273 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRTM2O43300 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRTM2O43300 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.42□□□□□ -1.86
LRRTM2O43300 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.42□□□□□ -1.86
LRRTM2O43300 USP9YP17-201ENST00000444617 696 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 RPL7P59-201ENST00000447700 943 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AC004022.1-201ENST00000447766 1066 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 PTGES3P5-201ENST00000455109 434 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 NECAP1P2-201ENST00000455668 727 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRTM2O43300 AC011352.3-201ENST00000505162 593 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 HSPD1P15-201ENST00000505573 1122 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AC114322.1-201ENST00000506771 926 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AC048346.1-201ENST00000510247 144 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 RNA5SP164-201ENST00000516533 110 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 RNA5SP135-201ENST00000517019 125 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRTM2O43300 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRTM2O43300 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRTM2O43300 MIR5708-201ENST00000579723 85 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AL669831.4-202ENST00000590817 238 ntBASIC3.42□□□□□ -1.86
LRRTM2O43300 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRTM2O43300 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.42□□□□□ -1.86
LRRTM2O43300 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRTM2O43300 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.42□□□□□ -1.86
LRRTM2O43300 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.42□□□□□ -1.86
LRRTM2O43300 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRTM2O43300 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LRRTM2O43300 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRTM2O43300 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRTM2O43300 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRTM2O43300 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRTM2O43300 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRRTM2O43300 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRRTM2O43300 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.41□□□□□ -1.86
LRRTM2O43300 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRRTM2O43300 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
LRRTM2O43300 RNU6-50P-201ENST00000362356 103 ntBASIC3.41□□□□□ -1.86
LRRTM2O43300 RNA5SP51-201ENST00000364750 119 ntBASIC3.41□□□□□ -1.86
LRRTM2O43300 RNA5SP235-201ENST00000365411 114 ntBASIC3.41□□□□□ -1.86
LRRTM2O43300 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
LRRTM2O43300 DEFB109C-201ENST00000382575 264 ntBASIC3.41□□□□□ -1.86
LRRTM2O43300 DEFB109B-201ENST00000382656 264 ntBASIC3.41□□□□□ -1.86
LRRTM2O43300 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LRRTM2O43300 GSTA8P-201ENST00000404253 637 ntBASIC3.41□□□□□ -1.86
LRRTM2O43300 RNA5SP56-201ENST00000410277 118 ntBASIC3.41□□□□□ -1.86
LRRTM2O43300 RNU4-78P-201ENST00000410940 126 ntBASIC3.41□□□□□ -1.86
LRRTM2O43300 LUZP4P1-201ENST00000415420 344 ntBASIC3.41□□□□□ -1.86
LRRTM2O43300 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms