Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC079416.3-201ENST00000624479 549 ntBASIC4.13□□□□□ -1.75
ATP2A1O14983 AC120349.2-201ENST00000625002 298 ntBASIC4.13□□□□□ -1.75
ATP2A1O14983 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.13□□□□□ -1.75
ATP2A1O14983 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATP2A1O14983 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATP2A1O14983 NCAPGP1-201ENST00000505112 1814 ntBASIC4.13□□□□□ -1.75
ATP2A1O14983 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATP2A1O14983 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ATP2A1O14983 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATP2A1O14983 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATP2A1O14983 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATP2A1O14983 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.13□□□□□ -1.75
ATP2A1O14983 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ATP2A1O14983 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATP2A1O14983 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.12□□□□□ -1.75
ATP2A1O14983 MIR3074-201ENST00000384885 81 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 RN7SKP111-201ENST00000410349 271 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 RNU2-28P-201ENST00000410457 189 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AC068533.2-201ENST00000411872 306 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 HMGB3P20-201ENST00000417997 600 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.12□□□□□ -1.75
ATP2A1O14983 AC092832.1-201ENST00000422934 400 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATP2A1O14983 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP2A1O14983 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP2A1O14983 RPL7P34-201ENST00000433316 712 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AL008629.1-201ENST00000438615 184 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP2A1O14983 RPL12P26-201ENST00000452430 487 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.12□□□□□ -1.75
ATP2A1O14983 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.12□□□□□ -1.75
ATP2A1O14983 AC010301.1-201ENST00000473936 355 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 SETP14-201ENST00000497538 873 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATP2A1O14983 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATP2A1O14983 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.12□□□□□ -1.75
ATP2A1O14983 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP2A1O14983 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP2A1O14983 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.12□□□□□ -1.75
ATP2A1O14983 AC125611.1-201ENST00000549563 229 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 ZNF321P-202ENST00000550843 495 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AL389895.1-201ENST00000554127 252 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.12□□□□□ -1.75
ATP2A1O14983 AC009712.1-201ENST00000564938 316 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AC145350.1-201ENST00000567426 208 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.12□□□□□ -1.75
ATP2A1O14983 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.12□□□□□ -1.75
ATP2A1O14983 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.12□□□□□ -1.75
ATP2A1O14983 VN1R79P-201ENST00000593540 513 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 VN1R82P-201ENST00000601481 356 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.12□□□□□ -1.75
ATP2A1O14983 AL158042.1-201ENST00000605338 460 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AL450489.1-201ENST00000612071 468 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AP003485.2-201ENST00000623636 610 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AC019226.2-201ENST00000625973 424 ntBASIC4.12□□□□□ -1.75
ATP2A1O14983 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATP2A1O14983 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATP2A1O14983 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATP2A1O14983 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.12□□□□□ -1.75
ATP2A1O14983 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
ATP2A1O14983 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.11□□□□□ -1.75
ATP2A1O14983 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATP2A1O14983 RNU6-216P-201ENST00000363282 104 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 MIR491-201ENST00000384877 84 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 RPL17P50-201ENST00000396131 546 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.11□□□□□ -1.75
ATP2A1O14983 AL049545.1-201ENST00000401856 572 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 BTBD10P2-201ENST00000404779 676 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 AL133384.1-201ENST00000412744 351 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 NDUFB1P1-201ENST00000435191 180 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 AC005019.1-201ENST00000436455 431 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 RPL23AP16-201ENST00000441715 421 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP2A1O14983 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP2A1O14983 U3.44-201ENST00000458938 192 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 RN7SL601P-201ENST00000471221 293 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 AC087385.1-201ENST00000475062 312 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 RPL32P34-201ENST00000486380 400 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP2A1O14983 AC016065.2-201ENST00000514530 444 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 AC105185.1-201ENST00000518705 535 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 IGKV2-23-201ENST00000518729 323 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.11□□□□□ -1.75
ATP2A1O14983 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.11□□□□□ -1.75
ATP2A1O14983 SLC2A13P1-201ENST00000531560 322 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.11□□□□□ -1.75
ATP2A1O14983 AC090502.2-201ENST00000549267 280 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 AC023161.2-201ENST00000551218 780 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 CBX3P5-201ENST00000552017 521 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 LSM6P2-201ENST00000552208 177 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.11□□□□□ -1.75
ATP2A1O14983 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.11□□□□□ -1.75
ATP2A1O14983 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
ATP2A1O14983 AC008751.2-201ENST00000597885 980 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 AC068313.1-201ENST00000604028 1008 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 AL592221.1-201ENST00000605266 382 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATP2A1O14983 uc_338.32-201ENST00000615087 172 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 AL713922.2-201ENST00000619384 716 ntBASIC4.11□□□□□ -1.75
ATP2A1O14983 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms