Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX4O14627 SNRPGP5-201ENST00000456003 220 ntBASIC3.26□□□□□ -1.89
CDX4O14627 RPS15AP1-201ENST00000457423 391 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AP000893.1-201ENST00000474462 794 ntBASIC3.26□□□□□ -1.89
CDX4O14627 RPL21P103-201ENST00000479921 488 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX4O14627 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX4O14627 RNA5SP154-201ENST00000516193 111 ntBASIC3.26□□□□□ -1.89
CDX4O14627 RN7SKP234-201ENST00000517173 224 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.26□□□□□ -1.89
CDX4O14627 MTND2P38-201ENST00000522536 667 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AP000926.4-201ENST00000527351 454 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AP001317.1-201ENST00000531194 960 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AC092747.2-201ENST00000545069 983 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX4O14627 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.26□□□□□ -1.89
CDX4O14627 AC007424.1-203ENST00000554613 687 ntBASIC3.26□□□□□ -1.89
CDX4O14627 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.26□□□□□ -1.89
CDX4O14627 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX4O14627 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX4O14627 AC074051.3-201ENST00000570238 358 ntBASIC3.26□□□□□ -1.89
CDX4O14627 MIR3945-201ENST00000581853 98 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AP003973.1-201ENST00000604639 691 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AP005137.2-201ENST00000609238 400 ntBASIC3.26□□□□□ -1.89
CDX4O14627 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDX4O14627 RNVU1-4-201ENST00000612985 164 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AL355493.4-201ENST00000618530 292 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AC123767.1-202ENST00000620407 817 ntBASIC3.26□□□□□ -1.89
CDX4O14627 C2orf27A-204ENST00000623058 969 ntBASIC3.26□□□□□ -1.89
CDX4O14627 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CDX4O14627 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDX4O14627 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDX4O14627 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.26□□□□□ -1.89
CDX4O14627 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CDX4O14627 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDX4O14627 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.26□□□□□ -1.89
CDX4O14627 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDX4O14627 AC000367.1-201ENST00000452711 1766 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.25□□□□□ -1.89
CDX4O14627 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDX4O14627 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDX4O14627 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDX4O14627 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CDX4O14627 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDX4O14627 RNU1-18P-201ENST00000363062 164 ntBASIC3.25□□□□□ -1.89
CDX4O14627 RNA5SP42-201ENST00000364278 115 ntBASIC3.25□□□□□ -1.89
CDX4O14627 RNA5SP235-201ENST00000365411 114 ntBASIC3.25□□□□□ -1.89
CDX4O14627 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CDX4O14627 RNU6-906P-201ENST00000384700 70 ntBASIC3.25□□□□□ -1.89
CDX4O14627 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX4O14627 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.25□□□□□ -1.89
CDX4O14627 RNA5SP80-201ENST00000410475 111 ntBASIC3.25□□□□□ -1.89
CDX4O14627 RNU6-575P-201ENST00000411326 105 ntBASIC3.25□□□□□ -1.89
CDX4O14627 HIGD1AP15-201ENST00000416198 280 ntBASIC3.25□□□□□ -1.89
CDX4O14627 Z75741.2-201ENST00000417272 1167 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.25□□□□□ -1.89
CDX4O14627 RPS15AP40-201ENST00000419621 391 ntBASIC3.25□□□□□ -1.89
CDX4O14627 MTND2P16-201ENST00000419987 799 ntBASIC3.25□□□□□ -1.89
CDX4O14627 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX4O14627 XKRYP1-201ENST00000423438 492 ntBASIC3.25□□□□□ -1.89
CDX4O14627 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX4O14627 DPRXP1-201ENST00000426312 460 ntBASIC3.25□□□□□ -1.89
CDX4O14627 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX4O14627 MTCO1P3-201ENST00000429327 192 ntBASIC3.25□□□□□ -1.89
CDX4O14627 RPL23AP69-201ENST00000431134 458 ntBASIC3.25□□□□□ -1.89
CDX4O14627 CETN4P-201ENST00000432407 469 ntBASIC3.25□□□□□ -1.89
CDX4O14627 XKRYP2-201ENST00000432915 492 ntBASIC3.25□□□□□ -1.89
CDX4O14627 ATP5HP2-201ENST00000433885 485 ntBASIC3.25□□□□□ -1.89
CDX4O14627 SETP5-201ENST00000437270 562 ntBASIC3.25□□□□□ -1.89
CDX4O14627 RAB11AP1-201ENST00000442978 646 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX4O14627 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX4O14627 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX4O14627 snoU13.7-201ENST00000459220 104 ntBASIC3.25□□□□□ -1.89
CDX4O14627 SNORD11.1-201ENST00000459482 85 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AC084357.1-201ENST00000473404 255 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.25□□□□□ -1.89
CDX4O14627 VPS26AP1-201ENST00000483197 979 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.25□□□□□ -1.89
CDX4O14627 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX4O14627 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.25□□□□□ -1.89
CDX4O14627 APOOP4-201ENST00000513530 597 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX4O14627 AP002404.1-201ENST00000532005 451 ntBASIC3.25□□□□□ -1.89
CDX4O14627 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDX4O14627 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.25□□□□□ -1.89
CDX4O14627 MIR4504-201ENST00000577413 92 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX4O14627 MIR5708-201ENST00000579723 85 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.25□□□□□ -1.89
CDX4O14627 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.25□□□□□ -1.89
CDX4O14627 AL020997.3-201ENST00000602843 359 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AC022022.2-201ENST00000602989 360 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.25□□□□□ -1.89
CDX4O14627 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.25□□□□□ -1.89
CDX4O14627 AC006065.5-201ENST00000623427 349 ntBASIC3.25□□□□□ -1.89
CDX4O14627 AL512506.2-201ENST00000624472 458 ntBASIC3.25□□□□□ -1.89
CDX4O14627 CU459211.1-201ENST00000635667 749 ntBASIC3.25□□□□□ -1.89
CDX4O14627 MIR4496-201ENST00000635896 61 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms