Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC010738.1-201ENST00000604970 987 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 U3.45-201ENST00000607547 219 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 AL138880.2-201ENST00000616214 239 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3B1O00203 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.32□□□□□ -1.88
AP3B1O00203 RNA5SP124-201ENST00000362739 110 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 SNORD56.3-201ENST00000363507 71 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 RNA5SP50-201ENST00000363731 107 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.32□□□□□ -1.88
AP3B1O00203 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.32□□□□□ -1.88
AP3B1O00203 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
AP3B1O00203 CD24P4-201ENST00000382840 243 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 RNA5SP44-201ENST00000410446 133 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 RPL36AP36-201ENST00000418616 301 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 AC006960.1-201ENST00000419980 153 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 GTF2IP23-201ENST00000423746 351 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.32□□□□□ -1.88
AP3B1O00203 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.32□□□□□ -1.88
AP3B1O00203 NIPA2P1-201ENST00000426223 976 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 AC079780.1-201ENST00000428259 207 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 AL590762.3-201ENST00000436372 640 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 AL645638.1-201ENST00000440519 361 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 AC115115.1-201ENST00000449927 248 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 RPL7P55-201ENST00000450522 746 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 ELOCP23-201ENST00000452014 332 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 MTND2P3-201ENST00000452458 470 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 AC093663.1-201ENST00000497190 394 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.32□□□□□ -1.88
AP3B1O00203 AC026616.1-201ENST00000523157 525 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.32□□□□□ -1.88
AP3B1O00203 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3B1O00203 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.32□□□□□ -1.88
AP3B1O00203 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.32□□□□□ -1.88
AP3B1O00203 MAGOH2P-202ENST00000584384 429 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 MIR4276-201ENST00000584832 70 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.32□□□□□ -1.88
AP3B1O00203 AL355365.1-201ENST00000616480 294 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.32□□□□□ -1.88
AP3B1O00203 AL392088.2-201ENST00000637607 285 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 MTND4P21-201ENST00000453886 1357 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
AP3B1O00203 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.32□□□□□ -1.88
AP3B1O00203 AC004972.1-201ENST00000623934 2209 ntBASIC3.32□□□□□ -1.88
AP3B1O00203 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.32□□□□□ -1.88
AP3B1O00203 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP3B1O00203 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
AP3B1O00203 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP3B1O00203 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP3B1O00203 API5P2-201ENST00000397055 1498 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 RNU6-619P-201ENST00000365146 108 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.31□□□□□ -1.88
AP3B1O00203 AL024474.1-201ENST00000404655 591 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 RPS15AP38-201ENST00000413110 372 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 TMEM167AP1-201ENST00000423409 219 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
AP3B1O00203 MTND4LP10-201ENST00000435146 291 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.31□□□□□ -1.88
AP3B1O00203 AC005019.1-201ENST00000436455 431 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.31□□□□□ -1.88
AP3B1O00203 PDSS1P2-201ENST00000449397 678 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.31□□□□□ -1.88
AP3B1O00203 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.31□□□□□ -1.88
AP3B1O00203 RPL32P34-201ENST00000486380 400 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 RPL21P13-201ENST00000488305 481 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 AC011352.3-201ENST00000505162 593 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 SETP12-201ENST00000514068 805 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 AP000916.1-201ENST00000533869 835 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.31□□□□□ -1.88
AP3B1O00203 AC005476.1-201ENST00000554427 397 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.31□□□□□ -1.88
AP3B1O00203 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.31□□□□□ -1.88
AP3B1O00203 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.31□□□□□ -1.88
AP3B1O00203 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.31□□□□□ -1.88
AP3B1O00203 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.31□□□□□ -1.88
AP3B1O00203 ZNF92P2-201ENST00000600543 1059 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 AC106900.2-201ENST00000604994 317 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.31□□□□□ -1.88
AP3B1O00203 AL159169.3-201ENST00000608871 561 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 VN1R9P-201ENST00000614184 867 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 AC006249.1-201ENST00000621223 471 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 AC034229.5-201ENST00000624258 185 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.31□□□□□ -1.88
AP3B1O00203 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.31□□□□□ -1.88
AP3B1O00203 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
AP3B1O00203 AC233263.6-201ENST00000631132 1963 ntBASIC3.31□□□□□ -1.88
AP3B1O00203 DBF4P1-201ENST00000412976 1892 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP3B1O00203 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.3□□□□□ -1.88
AP3B1O00203 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.3□□□□□ -1.88
AP3B1O00203 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP3B1O00203 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP3B1O00203 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
AP3B1O00203 RNU6-799P-201ENST00000363567 107 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.3□□□□□ -1.88
AP3B1O00203 SNORD65C-201ENST00000390962 71 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP3B1O00203 U3.42-201ENST00000408746 214 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.3□□□□□ -1.88
AP3B1O00203 ATG3P1-201ENST00000419507 911 ntBASIC3.3□□□□□ -1.88
AP3B1O00203 SDCBPP3-201ENST00000419629 891 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms