Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 RN7SKP57-201ENST00000517248 293 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 OR4R3P-201ENST00000525084 838 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 MIR3186-201ENST00000577404 85 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 YWHAQP7-201ENST00000603536 658 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC069545.1-201ENST00000605671 358 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC016877.3-201ENST00000606778 504 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 AC026634.1-201ENST00000634369 198 ntBASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NEDD8-MDP1E9PL57 ZNF33CP-201ENST00000432492 2030 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC068647.1-201ENST00000489539 2265 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC025125.1-201ENST00000624743 1922 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 Y_RNA.408-201ENST00000383987 102 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 SNORA70E-201ENST00000384492 135 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 MIR153-1-201ENST00000384914 90 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 TAF9BP1-201ENST00000396646 746 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC073264.1-201ENST00000411508 416 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 MTCO2P17-201ENST00000424336 677 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 DPRXP1-201ENST00000426312 460 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC091862.1-201ENST00000438016 1100 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 SKP1P1-201ENST00000438081 489 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC092393.1-201ENST00000439625 742 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 EEF1A1P39-201ENST00000440791 250 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC092155.2-201ENST00000454675 477 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 RN7SL330P-201ENST00000469709 307 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC011979.1-201ENST00000472300 483 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 MTCYBP16-201ENST00000509187 1129 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC021146.1-201ENST00000511202 716 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 APOOP4-201ENST00000513530 597 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC104057.1-201ENST00000515547 497 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 RN7SKP31-201ENST00000516354 278 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 SNORA48.10-201ENST00000516965 160 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC087808.1-201ENST00000520501 361 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 ARL2BPP5-201ENST00000523141 481 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC026333.2-201ENST00000542164 106 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC023813.2-201ENST00000564321 469 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AGGF1P5-201ENST00000567900 919 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC067852.3-201ENST00000589177 561 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AL162713.1-201ENST00000604480 262 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AL450336.1-201ENST00000605180 586 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 MIR7112-201ENST00000616126 65 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC073348.1-201ENST00000623002 331 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC127502.3-201ENST00000636170 1206 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 USP8P1-201ENST00000494673 3183 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AC032011.1-201ENST00000611703 1549 ntBASIC3.49□□□□□ -1.85
NEDD8-MDP1E9PL57 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 RNU6-492P-201ENST00000363035 104 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 SNORD116.1-201ENST00000365628 92 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AC069218.2-201ENST00000411665 344 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 RPL31P2-201ENST00000413849 377 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AL592310.1-201ENST00000414330 671 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AL161449.1-201ENST00000414531 1199 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 SSR1P2-201ENST00000415208 787 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 MTND2P16-201ENST00000419987 799 ntBASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.48□□□□□ -1.85
NEDD8-MDP1E9PL57 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms