Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 TRAV31-201ENST00000502780 342 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 KCTD9P5-201ENST00000504141 1170 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AC118282.1-201ENST00000506408 765 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 USP9YP5-201ENST00000511770 630 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AC119751.1-201ENST00000513357 765 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 SNORD116-30-201ENST00000516468 85 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 ZNF192P1-203ENST00000565888 810 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 XIST_intron.1-201ENST00000619444 68 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AC087565.3-202ENST00000642085 1603 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 NANOGP5-201ENST00000424456 877 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 AL356320.1-201ENST00000429616 163 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 AC092754.2-201ENST00000463506 460 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 AC021146.5-201ENST00000503544 545 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 RNU4-18P-201ENST00000516751 149 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 MTND5P21-201ENST00000531961 522 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 BDH2P1-201ENST00000602288 736 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 AL512633.1-201ENST00000399931 655 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 AC080125.1-201ENST00000414888 684 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 AL135786.1-201ENST00000415892 214 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 KLHL2P1-201ENST00000508691 521 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 AC091515.1-201ENST00000548110 679 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 PCNAP1-202ENST00000595299 752 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 AC010615.3-201ENST00000597319 394 ntBASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.8□□□□□ -1.96
SCN10AQ9Y5Y9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 AC000367.1-201ENST00000452711 1766 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 RNU1-100P-201ENST00000365255 165 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 HNRNPDP2-201ENST00000406475 478 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 RNU4-53P-201ENST00000410828 140 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 AC008280.2-201ENST00000455473 307 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 OR5H5P-201ENST00000503164 928 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 IGKV3-31-201ENST00000523109 329 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 AL845331.3-202ENST00000562856 261 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 MIR4648-201ENST00000580107 72 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 AC007938.3-201ENST00000604965 623 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 AC015726.3-201ENST00000624501 418 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 FRG1DP-201ENST00000635586 771 ntBASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN10AQ9Y5Y9 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 AL157700.1-201ENST00000561973 1432 ntBASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 AC138915.3-201ENST00000562908 1389 ntBASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 SNORD114-30-201ENST00000364448 72 ntBASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 HMGB1P13-201ENST00000406019 642 ntBASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 SNRPGP3-201ENST00000469405 227 ntBASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 AC055876.1-202ENST00000567053 138 ntBASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 AC090312.2-201ENST00000582687 378 ntBASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 AC009159.1-201ENST00000618386 642 ntBASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 AC048347.1-201ENST00000624621 427 ntBASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 SEPT7P7-201ENST00000420492 1301 ntBASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SCN10AQ9Y5Y9 SNORA3.2-201ENST00000408221 125 ntBASIC2.78□□□□□ -1.97
SCN10AQ9Y5Y9 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.78□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms