Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TIMM9P1-201ENST00000436122 256 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 RPS29P9-201ENST00000440360 171 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 snoU13.1-201ENST00000459157 104 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC010326.1-201ENST00000462726 602 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 RPS23P7-201ENST00000466210 444 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC068587.1-201ENST00000483613 781 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC007182.2-201ENST00000489251 402 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 RNA5SP360-201ENST00000516555 118 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 HMGB1P19-201ENST00000517578 577 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC011979.2-201ENST00000527568 352 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC018630.1-201ENST00000541376 925 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC124947.2-202ENST00000552735 133 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 TPRKBP2-201ENST00000565969 475 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC136624.4-201ENST00000573044 370 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC010680.3-201ENST00000604215 520 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC008277.2-201ENST00000605196 797 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AL109618.2-201ENST00000605527 211 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 MIR98-201ENST00000606724 119 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AL158211.4-201ENST00000606988 584 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 MIR4275-201ENST00000636486 87 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC108751.5-201ENST00000492880 1336 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 AC005832.2-201ENST00000538921 1430 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 NXPH1-205ENST00000602349 1953 ntBASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA9Q9Y5G4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 SNORA2.3-201ENST00000383920 135 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU6-637P-201ENST00000384050 107 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU6-754P-201ENST00000391166 107 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 RPL17P50-201ENST00000396131 546 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 SNORA77-201ENST00000408716 125 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU6-712P-201ENST00000410558 100 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 RPL7P57-201ENST00000423238 740 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC019097.1-201ENST00000424783 735 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 RPL18P10-201ENST00000425606 538 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC073464.1-201ENST00000429823 534 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 NRBF2P3-201ENST00000432731 865 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC010655.1-201ENST00000449336 292 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 BX842559.2-201ENST00000451418 605 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 C1DP4-201ENST00000455429 424 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC023194.1-201ENST00000493084 308 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 HMGB3P16-201ENST00000508037 287 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 SAP18P1-201ENST00000512058 390 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC107934.1-201ENST00000522215 217 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC022882.1-201ENST00000532142 501 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AP000857.1-201ENST00000532151 543 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 TOMM20P2-201ENST00000540082 421 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC012182.1-201ENST00000570133 895 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 RPL26P30-202ENST00000602923 645 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC083809.1-201ENST00000615051 472 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 MIR6130-201ENST00000619419 109 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 AC112204.3-201ENST00000623822 332 ntBASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHGA9Q9Y5G4 LINC01355-201ENST00000566551 5444 ntBASIC4.59□□□□□ -1.68
PCDHGA9Q9Y5G4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHGA9Q9Y5G4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHGA9Q9Y5G4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHGA9Q9Y5G4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHGA9Q9Y5G4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHGA9Q9Y5G4 AL365440.1-201ENST00000436135 2167 ntBASIC4.58□□□□□ -1.68
PCDHGA9Q9Y5G4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHGA9Q9Y5G4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
PCDHGA9Q9Y5G4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA9Q9Y5G4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHGA9Q9Y5G4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA9Q9Y5G4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA9Q9Y5G4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA9Q9Y5G4 OR4K15-201ENST00000305051 1216 ntBASIC4.58□□□□□ -1.68
PCDHGA9Q9Y5G4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA9Q9Y5G4 RNA5SP191-201ENST00000362585 102 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms