Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC023141.3-201ENST00000436698 278 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AL162389.1-201ENST00000449233 177 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AC112187.1-201ENST00000455837 479 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AL035690.1-201ENST00000490892 383 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AC092121.1-201ENST00000569452 202 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 OR1F2P-201ENST00000570470 933 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 TUG1_2.1-201ENST00000614234 87 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AC010615.1-201ENST00000594254 1764 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AC007529.1-201ENST00000418574 2178 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AC022325.1-201ENST00000502748 2199 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AL731532.1-201ENST00000623972 4236 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AC020656.2-201ENST00000613291 5309 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 RNA5SP110-201ENST00000362638 115 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 RNA5SP477-201ENST00000362639 119 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 Y_RNA.117-201ENST00000363294 101 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 SNORA23-201ENST00000365128 182 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AC097374.1-203ENST00000400783 485 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 RPS4XP7-201ENST00000406274 780 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 MIR1302-6-201ENST00000408466 90 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AC239809.1-201ENST00000450470 217 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 snoU109.4-201ENST00000458953 143 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 RN7SL352P-201ENST00000466002 277 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 RPL21P103-201ENST00000479921 488 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 HMGB3P17-201ENST00000504195 649 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 RNU6-1023P-201ENST00000516137 106 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 MIR3128-201ENST00000581957 66 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AC110743.1-201ENST00000584870 478 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 MIR4443-201ENST00000585052 53 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AC174048.1-201ENST00000603389 144 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 HMGN2P28-201ENST00000606102 262 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AL591135.1-201ENST00000401578 5914 ntBASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB11Q9Y5F2 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 EIF2AP4-201ENST00000424793 1781 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 AC007159.1-201ENST00000566529 4706 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 HSPA8P4-201ENST00000511877 1920 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 RNA5SP375-201ENST00000362975 119 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 Y_RNA.126-201ENST00000363382 111 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 Y_RNA.314-201ENST00000365114 102 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 Y_RNA.515-201ENST00000384535 112 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 MT-TW-201ENST00000387382 68 ntBASIC5.9□□□□□ -1.46
PCDHB11Q9Y5F2 ENSAP1-201ENST00000392855 326 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms