Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 MT-TC-201ENST00000387405 66 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 MIR1277-201ENST00000408536 78 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 USP9YP6-201ENST00000413550 854 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 AC007283.2-201ENST00000424739 197 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 TIMM9P3-201ENST00000428659 274 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 IFNWP4-201ENST00000453148 294 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 AC053481.1-201ENST00000467217 306 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 RN7SL41P-201ENST00000476144 297 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 RPL32P9-201ENST00000487963 407 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 RN7SL808P-201ENST00000496066 299 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 OR4P1P-201ENST00000530808 1136 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 TVP23CP2-201ENST00000571473 623 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 AP000907.4-201ENST00000604143 237 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 AP003117.2-201ENST00000606010 545 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 AC090510.2-201ENST00000617465 629 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 AC009902.3-201ENST00000606235 2172 ntBASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
R3HCC1Q9Y3T6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 RNA5SP52-201ENST00000362448 134 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 RNU6-867P-201ENST00000364956 107 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AC019155.1-201ENST00000382242 574 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 RNU6-761P-201ENST00000384148 107 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 SNORD51-201ENST00000384320 80 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 Y_RNA.493-201ENST00000384422 102 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 RNU6-114P-201ENST00000384704 105 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AC005517.2-201ENST00000424673 553 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AC006548.1-201ENST00000427470 102 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 DPPA2P1-201ENST00000428060 556 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AL662791.1-201ENST00000441992 928 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 Z95327.1-201ENST00000446082 482 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 NFU1P2-201ENST00000448700 469 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AC020893.1-201ENST00000502452 580 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 OR51K1P-201ENST00000510214 950 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AC105914.1-201ENST00000511798 226 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 RNU6-1220P-201ENST00000517126 108 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 IGLV3-26-201ENST00000520756 302 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 HMGB1P33-201ENST00000563485 527 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 BGLT3-201ENST00000564523 994 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 MIR548S-201ENST00000581352 82 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AC006504.3-201ENST00000586818 523 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 LINC00901.1-201ENST00000617252 152 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 U6.42-201ENST00000618440 107 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 AC112204.3-201ENST00000623822 332 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 CR381572.1-201ENST00000625098 102 ntBASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
R3HCC1Q9Y3T6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 RNY4P14-201ENST00000363656 96 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 Y_RNA.303-201ENST00000364998 94 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 RNA5SP428-201ENST00000365129 132 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 Y_RNA.453-201ENST00000384223 109 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 SNORA77-201ENST00000408716 125 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 ELOCP14-201ENST00000428070 331 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 ELOCP7-201ENST00000439968 331 ntBASIC5.4□□□□□ -1.54
R3HCC1Q9Y3T6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms