Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 SGO1P2-201ENST00000429458 1589 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 MFSD8-233ENST00000641482 4860 ntBASIC2.91□□□□□ -1.94
KCNIP3Q9Y2W7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.9□□□□□ -1.94
KCNIP3Q9Y2W7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.94
KCNIP3Q9Y2W7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
KCNIP3Q9Y2W7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.9□□□□□ -1.94
KCNIP3Q9Y2W7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 RNU6-1074P-201ENST00000383995 104 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 RNU2-15P-201ENST00000410692 191 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 AL356968.1-201ENST00000416622 474 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 OR1AA1P-201ENST00000419597 916 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 AC093151.1-201ENST00000427711 313 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 BX890604.2-201ENST00000427883 474 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 ISCA1P2-201ENST00000438679 421 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 AC008264.1-201ENST00000447612 367 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 UBDP1-202ENST00000457888 382 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 PNPLA4P1-201ENST00000458328 305 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 SUMO2P5-201ENST00000506790 245 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 AC006390.1-201ENST00000508068 283 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 AC010460.2-201ENST00000509054 677 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 RNU6-1095P-201ENST00000516148 108 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 MIR2276-201ENST00000516886 89 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 AP003102.1-201ENST00000525638 661 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 SNRPGP16-201ENST00000533275 226 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 MTCO3P24-201ENST00000572729 782 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 MIR5187-201ENST00000583479 76 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 BNIP3P24-201ENST00000593398 557 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 AL035411.2-201ENST00000604022 421 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 MIR6867-201ENST00000610636 67 ntBASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.9□□□□□ -1.95
KCNIP3Q9Y2W7 AP005901.5-201ENST00000545779 1796 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 SNORA51.4-201ENST00000364993 124 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 SNORD3H-201ENST00000384486 214 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 RNU6-878P-201ENST00000384578 110 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 Y_RNA.578-201ENST00000390903 88 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 SOD2P1-201ENST00000396543 562 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AL022722.2-201ENST00000402519 180 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AL591034.1-201ENST00000407447 340 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 RNA5SP344-201ENST00000411081 104 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 RPL7P30-201ENST00000420888 709 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC244505.4-201ENST00000434905 287 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 SSXP5-201ENST00000443473 287 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC097262.1-201ENST00000452559 548 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 RPS7P7-201ENST00000463499 571 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC026412.2-201ENST00000512270 1075 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 SNORA31.8-201ENST00000516327 108 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC104027.1-201ENST00000521887 300 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC010653.1-201ENST00000571108 881 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 DNAJC19P3-201ENST00000594491 331 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC245036.5-201ENST00000596330 847 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 BDH2P1-201ENST00000602288 736 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AL109653.1-201ENST00000603091 248 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC069545.1-201ENST00000605671 358 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC024060.1-201ENST00000607052 494 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 Mico1.1-201ENST00000611698 204 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AL357559.1-201ENST00000622228 274 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AP000346.3-201ENST00000622821 210 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC095031.1-201ENST00000623685 672 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 AC073476.4-201ENST00000628409 72 ntBASIC2.89□□□□□ -1.95
KCNIP3Q9Y2W7 U6.101-201ENST00000637707 76 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms