Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 AL136097.1-201ENST00000456945 913 ntBASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 RN7SL172P-201ENST00000460535 303 ntBASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 RNU6-488P-201ENST00000515918 99 ntBASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 SETP2-201ENST00000553886 926 ntBASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 AC055839.1-201ENST00000634467 498 ntBASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HPS5Q9UPZ3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 AL391987.6-201ENST00000305671 199 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 RNA5SP500-201ENST00000364486 119 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 RNU6-61P-201ENST00000365528 109 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 SNORA51.11-201ENST00000384442 131 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 Y_RNA.577-201ENST00000384794 101 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 RN7SKP213-201ENST00000410746 298 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 RPS4XP5-201ENST00000419038 768 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 AC108059.3-201ENST00000456388 214 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 AC104806.1-201ENST00000508720 308 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 SNORA43.3-201ENST00000517240 103 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 HMGN1P28-201ENST00000521340 364 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 HSPE1P2-201ENST00000554777 306 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 AC127381.1-201ENST00000555979 939 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 AC006600.1-201ENST00000572529 153 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 CDRT1-208ENST00000630868 794 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 RBPJP2-201ENST00000618187 1444 ntBASIC6.93□□□□□ -1.3
HPS5Q9UPZ3 AL137058.3-201ENST00000624531 3099 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 AL359893.1-201ENST00000447628 1580 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 Y_RNA.54-201ENST00000362766 105 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 Y_RNA.84-201ENST00000363011 104 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 SNORD1C-201ENST00000363315 78 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 RNU6-121P-201ENST00000410525 99 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 RN7SKP222-201ENST00000410651 315 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 AC008280.1-201ENST00000418851 412 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 RPL23AP69-201ENST00000431134 458 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 RPL36AP6-201ENST00000435770 321 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 AL663074.2-201ENST00000440621 479 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 RPSAP50-201ENST00000481955 852 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 RN7SL547P-201ENST00000490793 290 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 SNORA14.1-201ENST00000516113 141 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 IGKV2-36-201ENST00000519999 223 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 AL049872.1-201ENST00000556323 322 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 MIR4436B2-201ENST00000581415 91 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 MIR4436B1-201ENST00000583272 91 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 AC064801.1-201ENST00000612025 407 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 MIR6837-201ENST00000620884 64 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 TCP11X1-202ENST00000622971 1372 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 AC009902.3-201ENST00000606235 2172 ntBASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS5Q9UPZ3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms