Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RPL35AP28-201ENST00000459730 331 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-470P-201ENST00000515954 104 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.683-201ENST00000516508 93 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 RNU4-77P-201ENST00000516692 156 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 OR5M2P-201ENST00000529003 936 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AL049870.4-201ENST00000555741 486 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AC084783.1-201ENST00000565846 910 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 BNIP3P25-201ENST00000596023 559 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 BX664608.1-201ENST00000610519 487 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AC145207.9-201ENST00000623802 325 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AP001284.1-201ENST00000528393 2118 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 CDC27P2-201ENST00000425026 1922 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AC105074.1-201ENST00000623380 3095 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AC108751.5-201ENST00000492880 1336 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AP000432.2-201ENST00000624164 2048 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.26-201ENST00000362539 101 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-1339P-201ENST00000363574 91 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 RNY1-201ENST00000364228 113 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.424-201ENST00000384063 103 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.428-201ENST00000384078 102 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 RNA5SP339-201ENST00000390987 122 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AL109941.1-201ENST00000401925 229 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 RPSAP35-201ENST00000413753 818 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 RNF10P1-201ENST00000418589 369 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 RPL7P4-203ENST00000430239 730 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 OR6D1P-201ENST00000436165 939 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AC005019.1-201ENST00000436455 431 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AC006466.1-201ENST00000438721 289 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 NEFMP1-201ENST00000443423 1006 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 RPS27AP15-201ENST00000447672 466 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AL596266.1-201ENST00000448132 400 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AZGP1P2-201ENST00000454506 345 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AC006512.1-201ENST00000468816 291 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 RPS4XP18-201ENST00000495480 763 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AC006116.3-201ENST00000592968 361 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AC011468.4-201ENST00000603942 409 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 OR11H5P-202ENST00000641612 1325 ntBASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC7□□□□□ -1.29
PDZRN3Q9UPQ7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 DDX18P4-201ENST00000511690 1966 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.167-201ENST00000363735 109 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.170-201ENST00000363746 110 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.212-201ENST00000364177 102 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.214-201ENST00000364201 112 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 SNORA67-201ENST00000384423 137 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 RNU2-22P-201ENST00000411266 212 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 RPL7P29-201ENST00000437151 728 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 SLC25A18P1-201ENST00000449385 454 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AL139109.1-201ENST00000455491 297 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 RPL7P43-201ENST00000478876 753 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC022447.4-201ENST00000504053 364 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-346P-201ENST00000516288 111 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-201P-201ENST00000517100 61 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 HMGB1P23-201ENST00000518743 568 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 MIR4311-201ENST00000580794 100 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms