Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC091153.1-201ENST00000466297 402 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 MTND4LP3-201ENST00000468320 276 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LRFN1Q9P244 RPL23AP2-201ENST00000471227 466 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 RN7SL41P-201ENST00000476144 297 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LRFN1Q9P244 IGLVIV-65-201ENST00000517313 360 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 AC103783.1-201ENST00000520506 373 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 MTND4LP18-201ENST00000526864 291 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 MTCYBP33-201ENST00000575007 1130 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 OR4K8P-201ENST00000578842 1048 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 AC023575.1-201ENST00000580510 358 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LRFN1Q9P244 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LRFN1Q9P244 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LRFN1Q9P244 AL390237.1-201ENST00000404226 1415 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LRFN1Q9P244 AC092125.1-201ENST00000562568 1995 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LRFN1Q9P244 AC125257.1-201ENST00000560400 2930 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LRFN1Q9P244 FGF7P2-201ENST00000332473 296 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 RNU6-809P-201ENST00000384461 107 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 RN7SKP235-201ENST00000410662 305 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 AC011998.1-201ENST00000433403 117 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 SKP1P1-201ENST00000438081 489 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 MTND1P29-201ENST00000448112 647 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 AC011276.1-201ENST00000469688 323 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 AC112204.1-201ENST00000502591 103 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 RN7SKP21-201ENST00000516503 220 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 AP000827.1-201ENST00000527814 258 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 MIR8069-1-201ENST00000616627 86 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 AL158196.1-201ENST00000616786 434 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 MIR6130-201ENST00000619419 109 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 MIR8069-2-201ENST00000621412 86 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 AC112200.1-201ENST00000625015 234 ntBASIC4.18□□□□□ -1.74
LRFN1Q9P244 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.18□□□□□ -1.74
LRFN1Q9P244 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRFN1Q9P244 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRFN1Q9P244 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC116096.1-201ENST00000566804 2314 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRFN1Q9P244 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRFN1Q9P244 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LRFN1Q9P244 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 Y_RNA.46-201ENST00000362695 102 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 RNU6-1078P-201ENST00000364522 103 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 RNA5SP509-201ENST00000364577 119 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 SNORA51.2-201ENST00000364595 132 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 RNU6-533P-201ENST00000384144 107 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 RNY3P10-201ENST00000384764 102 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 MIR659-201ENST00000384963 97 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 RNU6-882P-201ENST00000391025 103 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 RPS20P2-201ENST00000402520 389 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 RPL7P25-201ENST00000404151 721 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 RN7SKP142-201ENST00000411236 328 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 NMNAT1P2-201ENST00000435192 860 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 THAP5P1-201ENST00000439089 262 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AL592447.1-201ENST00000447592 540 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 RPL23AP24-201ENST00000458203 385 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms