Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AP000619.3-201ENST00000535634 1127 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC005832.3-201ENST00000537929 631 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 DUXAP6-201ENST00000553858 601 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AADACP1-206ENST00000561502 1193 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC015688.2-201ENST00000584523 262 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 HMGN2P28-201ENST00000606102 262 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC009974.1-201ENST00000608881 455 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AL355816.2-201ENST00000610049 647 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC091046.2-201ENST00000620775 665 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC022509.4-201ENST00000621404 572 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC120349.2-201ENST00000625002 298 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC112200.1-201ENST00000625015 234 ntBASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMC4Q9NTJ3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AC109315.1-201ENST00000584143 1347 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 RNU4-92P-201ENST00000363783 136 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 RNU6-761P-201ENST00000384148 107 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AL136116.1-201ENST00000403591 381 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 PTP4A1P5-201ENST00000420305 455 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AL050321.1-201ENST00000432363 400 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 GOT2P5-201ENST00000433995 546 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 FCF1P3-201ENST00000496394 590 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AC093767.1-201ENST00000504523 156 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AC026333.2-201ENST00000542164 106 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 HIGD1AP17-201ENST00000554576 276 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AGGF1P5-201ENST00000567900 919 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 MIR3158-1-201ENST00000583596 81 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 BNIP3P26-201ENST00000600827 554 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AC103710.3-201ENST00000608157 948 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AC022149.2-201ENST00000621061 203 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 AC009093.8-201ENST00000641769 292 ntBASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SMC4Q9NTJ3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AL157700.1-201ENST00000561973 1432 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AC099786.3-201ENST00000565735 1410 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 RNA5SP167-201ENST00000365461 116 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 Y_RNA.493-201ENST00000384422 102 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 RNU2-42P-201ENST00000410697 113 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 CRYBB2P1-203ENST00000415709 538 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 MTCO2P17-201ENST00000424336 677 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AC092155.2-201ENST00000454675 477 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AC023598.1-201ENST00000472521 361 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AC106707.2-201ENST00000484182 374 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 SETP14-201ENST00000497538 873 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AC108078.3-201ENST00000502633 489 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 IGKV2-23-201ENST00000518729 323 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AC026403.1-201ENST00000518938 295 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AP000926.4-201ENST00000527351 454 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 BNIP3P22-201ENST00000593399 556 ntBASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SMC4Q9NTJ3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 NUP58P1-201ENST00000502546 1738 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 RNU6-335P-201ENST00000364563 113 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 RNU6-906P-201ENST00000384700 70 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 RNU6-328P-201ENST00000390887 106 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms