Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC112230.1-201ENST00000604342 547 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC124312.4-201ENST00000605533 310 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC245008.1-201ENST00000608123 476 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AL592295.2-201ENST00000612578 206 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AL354976.1-201ENST00000613843 387 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC009090.3-201ENST00000616553 565 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC009093.8-201ENST00000641769 292 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 CDR1-202ENST00000625883 1485 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC107027.3-201ENST00000565095 3473 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 RNU6-553P-201ENST00000364047 96 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 RPL31P52-201ENST00000407532 367 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AL022400.1-201ENST00000423946 935 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 IPMKP1-201ENST00000425988 855 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 BX679664.1-201ENST00000434429 253 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 RPS25P9-201ENST00000435591 252 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 RBMY2UP-201ENST00000453474 324 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 MTND3P7-201ENST00000474435 343 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 RPL30P11-201ENST00000495304 339 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AC082651.2-201ENST00000496833 166 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 SOD1P3-201ENST00000518682 454 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AL034351.1-201ENST00000605288 668 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AC112220.3-201ENST00000605502 502 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AC004223.4-201ENST00000612426 332 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AC078899.5-201ENST00000612475 178 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AC122133.1-201ENST00000613964 233 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AL607023.1-201ENST00000620045 248 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AC012442.3-202ENST00000636742 206 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AC068137.4-201ENST00000638485 296 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 MTND5P31-201ENST00000419366 1374 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AC107081.3-201ENST00000612715 2034 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AL645937.1-201ENST00000641739 1652 ntBASIC3.71□□□□□ -1.82
SIX2Q9NPC8 AL365440.1-201ENST00000436135 2167 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 RNA5SP197-201ENST00000363357 119 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 SNORD17-201ENST00000390930 237 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 HNRNPDP2-201ENST00000406475 478 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 Z99755.1-201ENST00000414048 380 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 B3GNT2P1-201ENST00000434960 952 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 UBE2D3P4-201ENST00000441973 436 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC097262.1-201ENST00000452559 548 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC106707.2-201ENST00000484182 374 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 RPL7P38-201ENST00000488396 739 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 XKRY-201ENST00000510392 1100 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC005476.1-201ENST00000554427 397 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AP005136.1-201ENST00000579765 429 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms