Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RPS4XP3-201ENST00000398541 413 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 RNA5SP317-201ENST00000410176 116 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 RNA5SP38-201ENST00000410750 119 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 RNA5SP311-201ENST00000411290 116 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 RPL32P35-201ENST00000415214 394 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 HSPE1P1-201ENST00000421494 318 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 RPL23AP74-201ENST00000437246 471 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 HSPE1P28-201ENST00000443139 211 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 CDC27P1-201ENST00000445384 715 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC008264.1-201ENST00000447612 367 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AL590664.1-201ENST00000448065 339 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AL589880.1-201ENST00000448271 287 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 COX6CP18-201ENST00000448769 222 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC140076.1-201ENST00000449897 361 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC097262.1-201ENST00000452559 548 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 USP9YP34-201ENST00000453983 808 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 RNA5SP310-201ENST00000459084 116 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 ST13P14-201ENST00000474095 734 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC006483.1-201ENST00000487308 313 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC093801.2-201ENST00000503966 1050 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 MTND4LP22-201ENST00000508209 276 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 RNA5SP315-201ENST00000516340 116 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 RNA5SP312-201ENST00000517068 116 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC245166.1-201ENST00000521012 253 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AP001189.2-201ENST00000527320 189 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC087894.1-201ENST00000538359 518 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC053481.3-201ENST00000577881 843 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC087499.8-201ENST00000578406 226 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 MIR5187-201ENST00000583479 76 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 RNU1-30P-201ENST00000606575 163 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC099778.2-201ENST00000610904 211 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 MIR6716-201ENST00000613413 80 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AL138880.2-201ENST00000616214 239 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AC073476.4-201ENST00000628409 72 ntBASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SND1-IT1Q9HBX3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC092435.3-201ENST00000565538 3654 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 MCTS2P-201ENST00000394552 546 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 RPL7P60-201ENST00000397636 735 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 RPS7P9-201ENST00000414704 586 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 LUZP4P1-201ENST00000415420 344 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC245052.5-201ENST00000416320 649 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC006960.1-201ENST00000419980 153 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 RPL27AP8-201ENST00000424277 446 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AL117339.2-201ENST00000430475 180 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 HMGB3P11-201ENST00000440127 604 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AL121871.1-201ENST00000443413 436 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 OR6K5P-201ENST00000447050 945 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 VN1R10P-201ENST00000447106 875 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AL359073.1-201ENST00000448036 403 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 SBDSP1-204ENST00000453858 737 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 SUMO2P2-201ENST00000456482 255 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 RPL30P14-201ENST00000482744 348 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms