Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC022616.6-201ENST00000520479 119 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC079075.1-201ENST00000559543 878 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC090312.1-201ENST00000580637 348 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AL391358.1-201ENST00000605342 190 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AL161616.1-201ENST00000611867 286 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 TPTEP1-208ENST00000636884 213 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 ZNF652P1-201ENST00000442420 1309 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 MFSD8-216ENST00000641147 4009 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 MTCO1P9-201ENST00000505577 1534 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 MTND5P3-201ENST00000438536 1800 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 SNORA69-201ENST00000383895 132 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 RNU6-952P-201ENST00000391164 108 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 RPL7P25-201ENST00000404151 721 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AL162578.1-201ENST00000406202 378 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AL590139.1-201ENST00000416267 400 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AL138785.1-201ENST00000425821 331 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 COX6CP15-201ENST00000426313 211 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AL589765.3-201ENST00000446084 462 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AC010733.1-201ENST00000451515 401 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 RN7SL346P-201ENST00000491561 294 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AC104057.1-201ENST00000515547 497 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 RN7SKP82-201ENST00000516786 223 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AP001880.2-201ENST00000538233 448 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AC091042.1-201ENST00000579213 173 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 AC010149.2-201ENST00000637608 315 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 MTND5P42-201ENST00000637720 498 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 ELL2P4-201ENST00000446870 1376 ntBASIC5.12□□□□□ -1.59
RNF38Q9H0F5 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF38Q9H0F5 NUP58P1-201ENST00000502546 1738 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AL731532.2-201ENST00000623542 1953 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC063976.2-201ENST00000425667 3556 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 RNU5E-1-201ENST00000362477 120 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 RNU6-223P-201ENST00000362830 107 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 SNORA32.2-201ENST00000384049 122 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 Y_RNA.431-201ENST00000384086 102 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 RNU6-1226P-201ENST00000384317 107 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 RPL23AP32-201ENST00000395315 459 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC013442.1-201ENST00000397347 228 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 DHFRP6-201ENST00000401776 268 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 SSXP10-201ENST00000402595 565 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AL357515.1-201ENST00000402967 542 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AL354719.1-201ENST00000406535 843 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 RNU2-9P-201ENST00000410194 145 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 RN7SKP100-201ENST00000411258 284 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 RAB28P1-201ENST00000411517 641 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 TBCAP2-201ENST00000416175 326 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 RPS15AP40-201ENST00000419621 391 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC019097.1-201ENST00000424783 735 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 SAR1AP4-201ENST00000429225 591 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 OR2B7P-201ENST00000429302 934 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 RPL34P6-201ENST00000432390 345 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC024082.2-201ENST00000434771 238 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC011753.3-201ENST00000443436 406 ntBASIC5.11□□□□□ -1.59
RNF38Q9H0F5 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF38Q9H0F5 PRPF38AP1-201ENST00000451976 933 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms