Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC243312.2-201ENST00000623340 601 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 AC244258.1-201ENST00000637553 1071 ntBASIC2.35□□□□□ -2.03
NKX6-2Q9C056 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NKX6-2Q9C056 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 RNA5SP258-201ENST00000362750 119 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 RNU6-1151P-201ENST00000384684 107 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 MIR323B-201ENST00000385269 82 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 ARF4P3-201ENST00000397387 509 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 RN7SKP220-201ENST00000410611 288 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 RPS3AP9-201ENST00000417027 792 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC008280.1-201ENST00000418851 412 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 PNRC2P1-201ENST00000423940 420 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 MTND4LP14-201ENST00000429447 288 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 RPL23AP74-201ENST00000437246 471 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 RPS29P7-201ENST00000439662 171 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 RPL21P23-201ENST00000446654 460 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC093663.2-201ENST00000484625 313 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 SEM1P1-201ENST00000506694 209 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 RNU6-488P-201ENST00000515918 99 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AL355836.1-201ENST00000555951 870 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC087481.2-201ENST00000565492 330 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC012182.1-201ENST00000570133 895 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 COX6CP3-201ENST00000580869 223 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 MIR3922-201ENST00000585192 84 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC012254.4-201ENST00000588843 273 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC103881.1-201ENST00000603476 538 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AL162713.1-201ENST00000604480 262 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AL023583.1-201ENST00000607518 1143 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 BX664608.1-201ENST00000610519 487 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 MIR6820-201ENST00000611508 62 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AP003400.6-201ENST00000624698 740 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AL355480.1-201ENST00000629041 99 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC009093.8-201ENST00000641769 292 ntBASIC2.34□□□□□ -2.03
NKX6-2Q9C056 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.34□□□□□ -2.04
NKX6-2Q9C056 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
NKX6-2Q9C056 MTCO1P18-201ENST00000455518 1419 ntBASIC2.34□□□□□ -2.04
NKX6-2Q9C056 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 NACA3P-201ENST00000359690 648 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 RNA5SP27-201ENST00000363839 119 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC083799.1-201ENST00000366451 910 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 TAF9BP1-201ENST00000396646 746 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AL049693.1-201ENST00000402760 611 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 ATP5F1P6-201ENST00000402768 767 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 PAICSP7-201ENST00000419829 962 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC233728.2-201ENST00000425348 757 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 FABP5P3-201ENST00000437960 408 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 CYCSP35-201ENST00000451978 304 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 MTND2P6-201ENST00000455337 1030 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 RPS29P2-201ENST00000479278 136 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC106707.2-201ENST00000484182 374 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 RPS27P27-201ENST00000498779 255 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC111000.2-201ENST00000507775 550 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC104057.1-201ENST00000515547 497 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AL133271.1-201ENST00000538229 291 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC093014.1-201ENST00000548926 724 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC067805.1-201ENST00000559344 470 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 MIR5186-201ENST00000577504 120 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms