Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC022364.2-201ENST00000457963 554 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 RPL35AP28-201ENST00000459730 331 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 RPL7P23-201ENST00000493874 747 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 RN7SKP46-201ENST00000515942 234 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 SCARNA16.4-201ENST00000516956 187 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 RNU6-64P-201ENST00000517119 105 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 NRON-201ENST00000517270 370 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 DEFB108D-201ENST00000527787 222 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 SLC25A36P1-201ENST00000590111 465 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC126915.2-201ENST00000610957 190 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC005609.4-201ENST00000625071 447 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 LINC01355-201ENST00000566551 5444 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 ZNF680P1-201ENST00000436625 1469 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 RNU6-511P-201ENST00000363496 107 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 RNU5E-4P-201ENST00000364931 120 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 MIR550A3-201ENST00000390735 95 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 RNU6-754P-201ENST00000391166 107 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 FGF7P8-201ENST00000402994 292 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 RN7SKP285-201ENST00000410137 318 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 RNU2-9P-201ENST00000410194 145 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AL109913.1-201ENST00000421173 514 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 NEK4P1-201ENST00000433383 879 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 PSMD10P3-201ENST00000437000 448 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 RPL36AP51-201ENST00000487216 318 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AL109766.1-201ENST00000555080 552 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AL162413.1-201ENST00000603198 110 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AC087763.1-201ENST00000603391 286 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 AC093838.1-201ENST00000613014 469 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 MAPK10-286ENST00000641208 8747 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.16□□□□□ -1.58
TRIM55Q9BYV6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.15□□□□□ -1.58
TRIM55Q9BYV6 AC126323.6-202ENST00000568092 3511 ntBASIC5.15□□□□□ -1.58
TRIM55Q9BYV6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM55Q9BYV6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM55Q9BYV6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.58
TRIM55Q9BYV6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM55Q9BYV6 AC025031.4-201ENST00000621248 3271 ntBASIC5.15□□□□□ -1.58
TRIM55Q9BYV6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 RNU4-44P-201ENST00000363050 141 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 SNORA51.8-201ENST00000384234 132 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 RNU6-74P-201ENST00000384235 107 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 RNU1-106P-201ENST00000384382 164 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 MIR124-3-201ENST00000384866 87 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AL035079.1-201ENST00000405210 287 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 MRPL50P2-201ENST00000416821 482 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AC009238.2-201ENST00000431026 355 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AL161722.2-201ENST00000434731 981 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AC005094.1-201ENST00000440420 368 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AC016696.1-201ENST00000446949 318 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AC104651.2-201ENST00000447549 528 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AC005008.1-201ENST00000456151 612 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 RPL36AP13-201ENST00000457490 317 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AC108161.1-201ENST00000461060 402 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AC083798.1-201ENST00000472671 131 ntBASIC5.15□□□□□ -1.59
TRIM55Q9BYV6 AC058823.1-201ENST00000485315 474 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms