Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.09□□□□□ -1.6
SLC38A3Q99624 AC100757.1-201ENST00000616872 1835 ntBASIC5.09□□□□□ -1.6
SLC38A3Q99624 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
SLC38A3Q99624 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
SLC38A3Q99624 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC38A3Q99624 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC38A3Q99624 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC38A3Q99624 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC38A3Q99624 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC38A3Q99624 AC112198.2-201ENST00000426589 6996 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AP005432.1-201ENST00000580891 3485 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC38A3Q99624 OR11H5P-202ENST00000641612 1325 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC38A3Q99624 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC38A3Q99624 RNU6-99P-201ENST00000364721 107 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC38A3Q99624 RNU6-38P-201ENST00000384085 107 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 Y_RNA.556-201ENST00000384677 113 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 MIR550A3-201ENST00000390735 95 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AL034403.1-201ENST00000399414 885 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AL133270.1-201ENST00000402635 279 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 MIR1303-201ENST00000408625 86 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 Y_RNA.646-201ENST00000410980 101 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AC078974.1-201ENST00000411597 223 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AL133482.1-201ENST00000415988 498 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AC093151.1-201ENST00000427711 313 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 AC093716.1-201ENST00000435923 377 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 AC092647.2-201ENST00000452998 253 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AC104308.1-201ENST00000454621 333 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 RNU6-333P-201ENST00000459117 107 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 RPL5P30-201ENST00000465511 891 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 RPL12P20-201ENST00000475538 479 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 RPS27P23-201ENST00000487608 251 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 RPL22P13-201ENST00000493291 347 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 RPSAP51-201ENST00000497462 645 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 HMGN1P9-201ENST00000515212 298 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 RN7SKP24-201ENST00000515888 284 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 RNU6-408P-201ENST00000515910 100 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 Y_RNA.661-201ENST00000516003 99 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 RNU6-976P-201ENST00000516086 111 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 AC022360.1-201ENST00000521058 340 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AP006245.2-201ENST00000522004 300 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AP002373.2-201ENST00000541631 1060 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 AL118558.2-201ENST00000556294 238 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 AC024940.4-201ENST00000605507 246 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC38A3Q99624 AC091953.2-201ENST00000623979 160 ntBASIC5.08□□□□□ -1.6
SLC38A3Q99624 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC38A3Q99624 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC38A3Q99624 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC38A3Q99624 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC38A3Q99624 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SLC38A3Q99624 PANDAR-201ENST00000629595 1506 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 AC112255.1-201ENST00000624070 2493 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC38A3Q99624 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
SLC38A3Q99624 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
SLC38A3Q99624 AC093849.1-201ENST00000563631 2209 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 RN7SKP185-201ENST00000362813 326 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 U3.3-201ENST00000362986 216 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 RNU1-146P-201ENST00000364015 165 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 Y_RNA.291-201ENST00000364886 113 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 RN7SKP153-201ENST00000365026 316 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SLC38A3Q99624 RPL37P10-201ENST00000412884 288 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC38A3Q99624 UQCRBP1-201ENST00000421129 336 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 SKA2P1-201ENST00000425592 390 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 AL590762.4-201ENST00000425885 253 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 RPL21P110-201ENST00000433345 446 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC38A3Q99624 AL136380.1-201ENST00000447970 162 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 GSTA11P-201ENST00000452866 669 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 BX284632.1-201ENST00000478218 541 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 RPL21P99-201ENST00000480369 423 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 TMEM248P1-201ENST00000510579 951 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC38A3Q99624 RN7SKP260-201ENST00000516907 149 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 AC022868.1-201ENST00000517767 391 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 POLR2KP1-201ENST00000553226 168 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC38A3Q99624 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC38A3Q99624 AL713866.2-201ENST00000603579 219 ntBASIC5.07□□□□□ -1.6
SLC38A3Q99624 AC010201.1-201ENST00000605051 540 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms