Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC012493.2-201ENST00000595083 291 ntBASIC4.56□□□□□ -1.68
SIN3AQ96ST3 AL161756.2-201ENST00000604597 246 ntBASIC4.56□□□□□ -1.68
SIN3AQ96ST3 AC025588.2-201ENST00000604851 466 ntBASIC4.56□□□□□ -1.68
SIN3AQ96ST3 AC007349.4-201ENST00000608114 532 ntBASIC4.56□□□□□ -1.68
SIN3AQ96ST3 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.56□□□□□ -1.68
SIN3AQ96ST3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.56□□□□□ -1.68
SIN3AQ96ST3 AL355596.1-201ENST00000565399 3996 ntBASIC4.56□□□□□ -1.68
SIN3AQ96ST3 USP8P1-201ENST00000494673 3183 ntBASIC4.56□□□□□ -1.68
SIN3AQ96ST3 PHKBP1-201ENST00000450951 1951 ntBASIC4.56□□□□□ -1.68
SIN3AQ96ST3 ZNF876P-202ENST00000398732 1485 ntBASIC4.56□□□□□ -1.68
SIN3AQ96ST3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 RNU6-413P-201ENST00000384115 107 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 SNORA51.12-201ENST00000384448 134 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 MIR1183-201ENST00000408856 89 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 HMGB1P49-201ENST00000418882 569 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 MTND2P16-201ENST00000419987 799 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AC079776.3-201ENST00000450665 370 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 PRELID3BP7-201ENST00000503606 469 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AC091951.3-201ENST00000504093 246 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AC008885.2-201ENST00000509506 930 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 SNORA64.4-201ENST00000516632 81 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AC090819.1-201ENST00000523800 1111 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AC023050.2-201ENST00000544968 387 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AL442163.2-201ENST00000553912 710 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 MTND3P12-201ENST00000559068 328 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AC018552.3-201ENST00000567416 561 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AC061975.8-201ENST00000587058 721 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 MIR8057-201ENST00000620957 69 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AL157770.1-201ENST00000623049 439 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AC019226.2-201ENST00000625973 424 ntBASIC4.55□□□□□ -1.68
SIN3AQ96ST3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.55□□□□□ -1.68
SIN3AQ96ST3 AC134882.1-201ENST00000603738 1676 ntBASIC4.54□□□□□ -1.68
SIN3AQ96ST3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 GSTA8P-201ENST00000404253 637 ntBASIC4.54□□□□□ -1.68
SIN3AQ96ST3 RNU4-47P-201ENST00000410876 114 ntBASIC4.54□□□□□ -1.68
SIN3AQ96ST3 AC007899.1-201ENST00000412776 775 ntBASIC4.54□□□□□ -1.68
SIN3AQ96ST3 MTCO1P3-201ENST00000429327 192 ntBASIC4.54□□□□□ -1.68
SIN3AQ96ST3 RPS12P18-201ENST00000442381 270 ntBASIC4.54□□□□□ -1.68
SIN3AQ96ST3 AC104689.1-201ENST00000473356 768 ntBASIC4.54□□□□□ -1.68
SIN3AQ96ST3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 MIR3912-201ENST00000577566 105 ntBASIC4.54□□□□□ -1.68
SIN3AQ96ST3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 PCNAP1-202ENST00000595299 752 ntBASIC4.54□□□□□ -1.68
SIN3AQ96ST3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 AC008725.1-201ENST00000605123 2263 ntBASIC4.54□□□□□ -1.68
SIN3AQ96ST3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 AL049737.1-201ENST00000413920 1403 ntBASIC4.54□□□□□ -1.68
SIN3AQ96ST3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SIN3AQ96ST3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 DCAF13P3-201ENST00000561147 1334 ntBASIC4.53□□□□□ -1.68
SIN3AQ96ST3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 SNORA9-201ENST00000384215 133 ntBASIC4.53□□□□□ -1.68
SIN3AQ96ST3 SKINT1L-201ENST00000401057 817 ntBASIC4.53□□□□□ -1.68
SIN3AQ96ST3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.53□□□□□ -1.68
SIN3AQ96ST3 RNU6-603P-201ENST00000411403 107 ntBASIC4.53□□□□□ -1.68
SIN3AQ96ST3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 CETN4P-201ENST00000432407 469 ntBASIC4.53□□□□□ -1.68
SIN3AQ96ST3 RAB11AP1-201ENST00000442978 646 ntBASIC4.53□□□□□ -1.68
SIN3AQ96ST3 COX6CP18-201ENST00000448769 222 ntBASIC4.53□□□□□ -1.68
SIN3AQ96ST3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 RPL32P34-201ENST00000486380 400 ntBASIC4.53□□□□□ -1.68
SIN3AQ96ST3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 AC008885.1-201ENST00000514930 301 ntBASIC4.53□□□□□ -1.68
SIN3AQ96ST3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIN3AQ96ST3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms