Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3□□□□□ -1.93
COL21A1Q96P44 snoU13.3-201ENST00000459441 104 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AC091179.1-201ENST00000461606 579 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AC078857.1-201ENST00000469870 667 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 HMGB1P38-201ENST00000490557 577 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AL358832.1-201ENST00000497800 389 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 CAB39P1-201ENST00000502277 460 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL21A1Q96P44 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3□□□□□ -1.93
COL21A1Q96P44 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3□□□□□ -1.93
COL21A1Q96P44 AC025768.1-201ENST00000510057 267 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 RNU6-202P-201ENST00000515998 96 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3□□□□□ -1.93
COL21A1Q96P44 MTCYBP41-201ENST00000528913 1123 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 OR4A45P-201ENST00000529954 901 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3□□□□□ -1.93
COL21A1Q96P44 AP003385.6-201ENST00000531603 374 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AC004217.3-201ENST00000551552 878 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AC011611.5-201ENST00000552477 578 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3□□□□□ -1.93
COL21A1Q96P44 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3□□□□□ -1.93
COL21A1Q96P44 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3□□□□□ -1.93
COL21A1Q96P44 AC107954.1-201ENST00000565906 727 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AC079148.1-201ENST00000565944 819 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AC074051.3-201ENST00000570238 358 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 BPTFP1-201ENST00000579209 492 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 DPRXP5-201ENST00000604662 539 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 HMGN2P28-201ENST00000606102 262 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AL021368.1-201ENST00000607490 540 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3□□□□□ -1.93
COL21A1Q96P44 AL354976.1-201ENST00000613843 387 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 VN1R9P-201ENST00000614184 867 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AC009464.1-201ENST00000615731 469 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AC068722.2-201ENST00000618734 544 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3□□□□□ -1.93
COL21A1Q96P44 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
COL21A1Q96P44 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3□□□□□ -1.93
COL21A1Q96P44 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3□□□□□ -1.93
COL21A1Q96P44 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
COL21A1Q96P44 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL21A1Q96P44 MTND5P1-201ENST00000445440 1375 ntBASIC3□□□□□ -1.93
COL21A1Q96P44 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL21A1Q96P44 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC117529.2-201ENST00000512159 2068 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL21A1Q96P44 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL21A1Q96P44 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL21A1Q96P44 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL21A1Q96P44 RNA5SP120-201ENST00000410900 112 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 RPL36P19-201ENST00000430744 301 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC006028.1-201ENST00000438379 402 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC089999.1-201ENST00000460336 374 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 VN1R17P-201ENST00000472048 1090 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 RPS4XP13-201ENST00000483219 789 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC112518.2-201ENST00000508565 425 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC119751.5-201ENST00000514077 770 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC027338.1-201ENST00000514840 825 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 PRELID3BP4-201ENST00000515476 571 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 RNA5SP385-201ENST00000515947 110 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC092470.1-201ENST00000546187 132 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC055876.1-202ENST00000567053 138 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 AP002906.1-201ENST00000603405 233 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC113368.1-201ENST00000603736 382 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 AL513477.2-201ENST00000607858 568 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COL21A1Q96P44 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL21A1Q96P44 MTCO1P4-201ENST00000520516 1409 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 MTND5P24-201ENST00000438892 1767 ntBASIC2.99□□□□□ -1.93
COL21A1Q96P44 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL21A1Q96P44 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL21A1Q96P44 AP001350.1-201ENST00000601906 1524 ntBASIC2.98□□□□□ -1.93
COL21A1Q96P44 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL21A1Q96P44 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL21A1Q96P44 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL21A1Q96P44 RNU6-1226P-201ENST00000384317 107 ntBASIC2.98□□□□□ -1.93
COL21A1Q96P44 AL138880.1-201ENST00000405824 642 ntBASIC2.98□□□□□ -1.93
COL21A1Q96P44 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
COL21A1Q96P44 RN7SKP58-201ENST00000411010 305 ntBASIC2.98□□□□□ -1.93
COL21A1Q96P44 OR51A3P-201ENST00000413596 924 ntBASIC2.98□□□□□ -1.93
COL21A1Q96P44 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms