Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 AC123767.1-202ENST00000620407 817 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 MIR6500-201ENST00000622700 86 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 AC104985.3-201ENST00000623479 597 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 AC090897.3-201ENST00000636973 1157 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 AC013437.2-201ENST00000639587 677 ntBASIC3.74□□□□□ -1.81
VMP1Q96GC9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VMP1Q96GC9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VMP1Q96GC9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VMP1Q96GC9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VMP1Q96GC9 AC097714.1-201ENST00000511272 1647 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VMP1Q96GC9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 RNU4-51P-201ENST00000364206 140 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VMP1Q96GC9 FAT1P1-201ENST00000406588 507 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 MRPL50P2-201ENST00000416821 482 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC007742.1-201ENST00000425789 329 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 MTATP6P4-201ENST00000427725 675 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 HIGD1AP12-201ENST00000427832 281 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 ELOCP26-201ENST00000436067 329 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC023424.2-201ENST00000493479 777 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC010460.1-201ENST00000507087 466 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC112206.4-201ENST00000515142 405 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 RNU6-276P-201ENST00000516114 96 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 RN7SKP31-201ENST00000516354 278 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 HIGD1AP17-201ENST00000554576 276 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC120057.2-201ENST00000571520 271 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC053481.4-201ENST00000583164 216 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC022916.3-201ENST00000592961 742 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 AL133393.1-201ENST00000603277 287 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 AP002826.1-201ENST00000608835 315 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC018645.2-201ENST00000609151 472 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 AL450489.1-201ENST00000612071 468 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC023158.2-201ENST00000614876 543 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 MIR6875-201ENST00000617506 72 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VMP1Q96GC9 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC084824.4-201ENST00000620106 731 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC106858.1-201ENST00000637497 429 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VMP1Q96GC9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
VMP1Q96GC9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VMP1Q96GC9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 TAB3P1-202ENST00000452645 1634 ntBASIC3.73□□□□□ -1.81
VMP1Q96GC9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
VMP1Q96GC9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.73□□□□□ -1.81
VMP1Q96GC9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VMP1Q96GC9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
VMP1Q96GC9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.72□□□□□ -1.81
VMP1Q96GC9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.72□□□□□ -1.81
VMP1Q96GC9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.72□□□□□ -1.81
VMP1Q96GC9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.72□□□□□ -1.81
VMP1Q96GC9 HIGD1AP4-201ENST00000430194 280 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 MTND2P20-201ENST00000440805 661 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 RPS11P1-201ENST00000451072 473 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.72□□□□□ -1.81
VMP1Q96GC9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.72□□□□□ -1.81
VMP1Q96GC9 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VMP1Q96GC9 VN1R105P-201ENST00000486595 910 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 TMEM251P1-201ENST00000503717 318 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 HMGB1P28-201ENST00000507778 552 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.72□□□□□ -1.81
VMP1Q96GC9 AC113347.3-201ENST00000509113 148 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.72□□□□□ -1.81
VMP1Q96GC9 AC022861.1-201ENST00000522981 663 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 MTND1P6-201ENST00000523621 946 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.72□□□□□ -1.81
VMP1Q96GC9 GNRHR2P1-201ENST00000555315 631 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 AC005951.1-201ENST00000576706 485 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.72□□□□□ -1.81
VMP1Q96GC9 TUG1_1.1-201ENST00000610654 145 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 AC243773.3-201ENST00000613270 256 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 AC008121.2-201ENST00000614647 523 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 AC025588.4-201ENST00000615802 908 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 MIR6076-201ENST00000617521 113 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 AL139089.1-201ENST00000620372 975 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VMP1Q96GC9 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.72□□□□□ -1.81
VMP1Q96GC9 CRYM-AS1-204ENST00000637983 556 ntBASIC3.72□□□□□ -1.81
VMP1Q96GC9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VMP1Q96GC9 MFSD8-236ENST00000641509 4050 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms