Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
IFT43Q96FT9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
IFT43Q96FT9 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
IFT43Q96FT9 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
IFT43Q96FT9 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
IFT43Q96FT9 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
IFT43Q96FT9 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
IFT43Q96FT9 RNA5SP46-201ENST00000362370 120 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 RNU6-61P-201ENST00000365528 109 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 SNORA24.1-201ENST00000384401 135 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 Y_RNA.557-201ENST00000384680 107 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 Y_RNA.576-201ENST00000384781 102 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 OR2AT2P-201ENST00000413438 905 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 MCFD2P1-201ENST00000417812 300 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC018865.2-201ENST00000423631 129 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC092162.1-201ENST00000432828 434 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 AL160004.2-201ENST00000432935 350 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 CYCSP12-201ENST00000437729 300 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 H2AFZP6-201ENST00000444403 394 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 MTND1P17-201ENST00000448961 204 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 RPL12P39-201ENST00000455456 496 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 RPS23P2-201ENST00000463671 415 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 UBA52P7-201ENST00000486088 380 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC074255.1-201ENST00000511259 501 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 RFPL4AP5-201ENST00000514977 504 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 RNU6-64P-201ENST00000517119 105 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 OR11H5P-201ENST00000554039 926 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 SNORD95-201ENST00000579879 68 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 MIR4433B-201ENST00000581329 102 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC007448.1-201ENST00000582714 234 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC023043.2-201ENST00000589678 1026 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 AC006363.1-201ENST00000603806 463 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 NANOGP3-201ENST00000605855 286 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 RN7SL544P-201ENST00000617232 284 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
IFT43Q96FT9 RN7SL763P-201ENST00000620922 284 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 AL357559.1-201ENST00000622228 274 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 AL691477.1-201ENST00000624398 162 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
IFT43Q96FT9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
IFT43Q96FT9 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
IFT43Q96FT9 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.83□□□□□ -1.48
IFT43Q96FT9 GVINP1-202ENST00000531871 7271 ntBASIC5.83□□□□□ -1.48
IFT43Q96FT9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 Y_RNA.5-201ENST00000362334 102 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 RN7SKP145-201ENST00000363291 303 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 RNU6-1078P-201ENST00000364522 103 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 SNORD3H-201ENST00000384486 214 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 RNU6-1222P-201ENST00000384615 107 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 RNA5SP91-201ENST00000390902 119 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 DBIP1-201ENST00000401435 260 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 RNU4-46P-201ENST00000410818 138 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT43Q96FT9 RPL7P46-201ENST00000425129 740 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 Z95327.1-201ENST00000446082 482 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 AC104058.1-201ENST00000448028 297 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 RN7SL177P-201ENST00000476596 299 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 AC079140.5-201ENST00000507882 310 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 AC104806.1-201ENST00000508720 308 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 ATP5LP3-201ENST00000514223 304 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 AC139365.2-201ENST00000517972 253 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 IGLV3-30-201ENST00000524362 298 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 AC023442.1-201ENST00000531247 422 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 AC009852.2-201ENST00000567898 485 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 MYL12BP1-201ENST00000569826 507 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 AC138761.3-201ENST00000579993 334 ntBASIC5.82□□□□□ -1.48
IFT43Q96FT9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.82□□□□□ -1.48
IFT43Q96FT9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms