Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 Y_RNA.9-201ENST00000362354 101 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RNA5SP258-201ENST00000362750 119 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RNA5SP307-201ENST00000362863 116 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RNU1-20P-201ENST00000363314 162 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RNU6-97P-201ENST00000363387 104 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RNU6-1207P-201ENST00000384343 107 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 Y_RNA.554-201ENST00000384672 102 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 MTND4LP20-201ENST00000402379 270 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RNU2-15P-201ENST00000410692 191 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RPL7AP25-201ENST00000423357 805 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RPEP3-201ENST00000425462 676 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AL138785.1-201ENST00000425821 331 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AL589872.1-201ENST00000426602 288 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RPS12P10-201ENST00000427031 377 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AC068287.1-201ENST00000430283 295 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 RPL23AP25-201ENST00000430973 463 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 MTATP6P30-201ENST00000443540 664 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 FGF7P6-202ENST00000451282 293 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AC009220.1-201ENST00000451614 275 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AC087385.1-201ENST00000475062 312 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 OR51K1P-201ENST00000510214 950 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AP003122.4-201ENST00000530980 758 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 GSTP1P1-201ENST00000548078 319 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AC009159.1-201ENST00000618386 642 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AC009704.2-201ENST00000618739 483 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AC006065.6-201ENST00000625201 545 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 MIR6863-201ENST00000636112 90 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 AC004520.1-201ENST00000608362 1413 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 LINC01109-201ENST00000603837 3081 ntBASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTHRC1Q96CG8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC105074.1-201ENST00000623380 3095 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC008033.1-201ENST00000216407 1162 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 RNU4-12P-201ENST00000365233 139 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 MIR141-201ENST00000384975 95 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 MIR1250-201ENST00000408098 113 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 Y_RNA.604-201ENST00000410574 102 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 RN7SKP167-201ENST00000411047 285 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC004987.3-201ENST00000413879 771 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AL353777.1-201ENST00000425552 326 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 PSMA2P3-201ENST00000429685 675 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 UBE2V1P13-201ENST00000436983 439 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 snoU13.1-201ENST00000459157 104 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 MTCO3P38-201ENST00000468910 766 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC012170.1-201ENST00000495139 359 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 CEACAMP10-202ENST00000495431 496 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC022616.6-201ENST00000520479 119 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 PTP4A1P6-201ENST00000531034 478 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 AC068446.3-201ENST00000555285 382 ntBASIC4.16□□□□□ -1.74
CTHRC1Q96CG8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms