Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MIR3690-201ENST00000580266 75 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC008751.2-201ENST00000597885 980 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC011468.4-201ENST00000603942 409 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC008745.1-201ENST00000604064 271 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC018755.4-201ENST00000619715 454 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 PLCE1P1-201ENST00000622094 305 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.42□□□□□ -1.86
RFT1Q96AA3 AC004925.1-201ENST00000624256 2706 ntBASIC3.42□□□□□ -1.86
RFT1Q96AA3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RFT1Q96AA3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RFT1Q96AA3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFT1Q96AA3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFT1Q96AA3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RFT1Q96AA3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFT1Q96AA3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RFT1Q96AA3 RNU6-600P-201ENST00000362524 99 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 RNU6-1181P-201ENST00000384191 106 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 RNU6-83P-201ENST00000384568 112 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 MIR184-201ENST00000384962 84 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 MIR591-201ENST00000385290 95 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 AL391417.1-201ENST00000404100 426 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 MIR1284-201ENST00000408337 120 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 RN7SKP285-201ENST00000410137 318 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 RPL7AP73-201ENST00000413490 353 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC092447.6-201ENST00000414578 210 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 MTCO3P12-201ENST00000416718 547 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 MTCO2P21-201ENST00000419780 677 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 XKRYP1-201ENST00000423438 492 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 XKRYP2-201ENST00000432915 492 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 HMGB1P12-201ENST00000438594 598 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 RANP8-201ENST00000444720 713 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 RPS11P1-201ENST00000451072 473 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC010285.1-201ENST00000470580 392 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 RPS4XP13-201ENST00000483219 789 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC104090.1-201ENST00000506341 1171 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC108064.1-201ENST00000513791 460 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 RN7SKP244-201ENST00000516513 307 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 RN7SKP209-201ENST00000516888 304 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 C1GALT1P3-201ENST00000522049 819 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 DEFB131D-201ENST00000526803 184 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 OR4P1P-201ENST00000530808 1136 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC018630.1-201ENST00000541376 925 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 CYCSP2-201ENST00000558168 301 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 VN1R78P-201ENST00000597393 564 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 BNIP3P11-201ENST00000603878 563 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 AL365503.1-201ENST00000605247 905 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC011816.2-201ENST00000607089 556 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC245297.2-201ENST00000610119 565 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 MIR6868-201ENST00000611215 58 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 AL450489.1-201ENST00000612071 468 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 MIR3653-201ENST00000625572 110 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFT1Q96AA3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RFT1Q96AA3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 OR4G11P-202ENST00000642116 1414 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 AC005183.1-201ENST00000603687 1979 ntBASIC3.41□□□□□ -1.86
RFT1Q96AA3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.41□□□□□ -1.86
RFT1Q96AA3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RFT1Q96AA3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RFT1Q96AA3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RFT1Q96AA3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFT1Q96AA3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFT1Q96AA3 RPL23AP57-201ENST00000332361 466 ntBASIC3.4□□□□□ -1.87
RFT1Q96AA3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFT1Q96AA3 AC007256.1-201ENST00000392253 2765 ntBASIC3.4□□□□□ -1.87
RFT1Q96AA3 RPS4XP9-201ENST00000405151 780 ntBASIC3.4□□□□□ -1.87
RFT1Q96AA3 AP000567.1-201ENST00000406413 156 ntBASIC3.4□□□□□ -1.87
RFT1Q96AA3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms