Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 SCN1A-220ENST00000641603 12506 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC087190.4-201ENST00000574616 8334 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 OR11H4-201ENST00000315409 1082 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 RNU4-91P-201ENST00000364778 135 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 RNU6-744P-201ENST00000365557 107 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 RNU6-1316P-201ENST00000384242 108 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 RNU6-769P-201ENST00000384407 104 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 Y_RNA.553-201ENST00000384670 102 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 MTCO1P17-201ENST00000411522 491 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 ELOCP18-201ENST00000434209 337 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AL353706.1-201ENST00000436728 494 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 VN1R34P-201ENST00000447387 883 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AP000542.1-201ENST00000448473 371 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 OR6K1P-201ENST00000456766 971 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC010625.1-201ENST00000511296 403 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 PTGES3P3-201ENST00000511479 482 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 RNU6-27P-201ENST00000516146 107 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 RNU4-60P-201ENST00000517239 135 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 IGHV3-32-201ENST00000519182 355 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AP003385.6-201ENST00000531603 374 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 MIR4307-201ENST00000582802 84 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC083760.1-201ENST00000589621 670 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AL669831.4-202ENST00000590817 238 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 RPL7P50-201ENST00000600588 727 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 PRELID3BP8-201ENST00000604148 295 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC068276.1-201ENST00000605793 379 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC006329.2-201ENST00000611491 394 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC009878.1-201ENST00000621819 340 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC006065.5-201ENST00000623427 349 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 AC112200.1-201ENST00000625015 234 ntBASIC4.24□□□□□ -1.73
HMGB4Q8WW32 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGB4Q8WW32 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 RNU5F-7P-201ENST00000363696 115 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 PTMAP2-201ENST00000397627 327 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 MTCYBP36-201ENST00000404146 440 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 MIR1911-201ENST00000410783 80 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 RPL17P12-201ENST00000413391 526 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC006548.1-201ENST00000427470 102 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 MTCO1P19-201ENST00000443487 500 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 HMGB1P15-201ENST00000453854 435 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 RNA5SP269-201ENST00000459032 137 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AP000797.1-201ENST00000478870 387 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC023424.2-201ENST00000493479 777 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 TXNP6-201ENST00000510190 310 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 RNA5SP143-201ENST00000516936 115 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC025881.1-201ENST00000518851 512 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AC107954.1-201ENST00000565906 727 ntBASIC4.23□□□□□ -1.73
HMGB4Q8WW32 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms