Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 RNA5SP167-201ENST00000365461 116 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 NANOGP5-201ENST00000424456 877 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 OR8X1P-201ENST00000534542 869 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 AL136981.2-201ENST00000617319 734 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 AC110774.1-201ENST00000623567 2018 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 RPL31P45-201ENST00000419532 356 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 RN7SL636P-201ENST00000497504 294 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 ATG10-AS1-201ENST00000504846 648 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 HMGB1P41-201ENST00000520234 440 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 ADAM3A-203ENST00000461344 2157 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 RNU6-482P-201ENST00000391068 107 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 SAR1AP2-201ENST00000392696 594 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 AL034379.1-201ENST00000423216 253 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 XIST_intron.1-201ENST00000619444 68 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 MTND5P23-201ENST00000430812 1655 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 MTCYBP37-201ENST00000510642 1133 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 AP000526.1-201ENST00000603308 1388 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 SNORD62.1-201ENST00000362541 86 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 AL590290.1-201ENST00000405336 380 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 HPRT1P3-201ENST00000539521 576 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 MIR6845-201ENST00000613182 61 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 AC092447.7-201ENST00000422212 1621 ntBASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
ALMS1Q8TCU4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 RLIMP2-201ENST00000427891 1563 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 FAM35CP-201ENST00000554755 2470 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 MIR1287-201ENST00000408492 90 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 RNA5SP425-201ENST00000410336 112 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 RNA5SP344-201ENST00000411081 104 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AL592045.1-201ENST00000429867 352 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AC012170.1-201ENST00000495139 359 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AC116337.1-201ENST00000509680 687 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 RN7SKP31-201ENST00000516354 278 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AF127577.6-201ENST00000623352 2191 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AC000367.1-201ENST00000452711 1766 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AL359511.1-201ENST00000402970 211 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 MTCO3P11-201ENST00000455103 774 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 ACTR6P1-201ENST00000514311 1104 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AC011155.1-201ENST00000316512 456 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 RPLP0P7-201ENST00000416050 667 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 VDAC1P3-201ENST00000434069 851 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 RPL30P9-201ENST00000465586 330 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AP004217.1-201ENST00000480579 346 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 OR8L1P-201ENST00000534005 955 ntBASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
ALMS1Q8TCU4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms