Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AL033528.1-201ENST00000453780 140 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 OR6K1P-201ENST00000456766 971 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC022795.1-201ENST00000473808 480 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 HMGB3P16-201ENST00000508037 287 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC022861.1-201ENST00000522981 663 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC124068.1-201ENST00000563131 678 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 MIR4528-201ENST00000577763 90 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AP001180.3-201ENST00000582221 145 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 MIR544B-201ENST00000582372 78 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC015871.2-201ENST00000603605 948 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC079587.1-201ENST00000603846 277 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AL391684.1-202ENST00000641293 1636 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC024560.2-201ENST00000507981 1497 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 CPHL1P-201ENST00000461341 3407 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 RNU6-952P-201ENST00000391164 108 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 RAD23BP2-201ENST00000416003 1207 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AIMP1P1-201ENST00000418670 937 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 Z97055.1-201ENST00000419730 712 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AL356583.2-201ENST00000426536 280 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC109583.1-201ENST00000432156 268 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AL356276.2-201ENST00000435919 558 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC007967.1-201ENST00000455422 1159 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC093899.1-201ENST00000457984 376 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 PABPC1P3-201ENST00000469174 459 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 RPL9P33-201ENST00000484311 566 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC138853.1-201ENST00000503549 823 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 KCTD9P2-201ENST00000512203 1013 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 OR5G4P-201ENST00000525251 760 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 OR5AP1P-201ENST00000529730 940 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 FKBP1BP1-201ENST00000553366 325 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 MIR4716-201ENST00000579628 84 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 MIR4307-201ENST00000582802 84 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 BBIP1P1-201ENST00000602999 279 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC109347.2-201ENST00000610220 349 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC026368.1-201ENST00000614934 690 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AC015967.1-201ENST00000619893 476 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AL603839.4-201ENST00000624658 1005 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AL596275.2-204ENST00000641628 552 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AL596275.2-206ENST00000641957 626 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 AL133243.3-201ENST00000617415 3004 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 FAM91A3P-201ENST00000456826 2544 ntBASIC5.24□□□□□ -1.57
SMC1BQ8NDV3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AC130650.2-201ENST00000618736 2403 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 RNU1-83P-201ENST00000363426 164 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AL139095.3-201ENST00000419672 1203 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 MTCYBP5-201ENST00000423752 1135 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 NMNAT1P2-201ENST00000435192 860 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 RPL12P46-201ENST00000436610 195 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms