Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC090337.1-201ENST00000579651 2074 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 MTND4P4-201ENST00000439033 1366 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC105074.1-201ENST00000623380 3095 ntBASIC4.52□□□□□ -1.69
CCDC33Q8N5R6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AC092447.10-201ENST00000620607 1652 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 DCAF13P1-201ENST00000495256 1330 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 OR11H4-201ENST00000315409 1082 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 RN7SKP44-201ENST00000363602 316 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 Y_RNA.234-201ENST00000364409 97 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 RNA5SP22-201ENST00000365393 109 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 MIR1911-201ENST00000410783 80 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 MTCO1P17-201ENST00000411522 491 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 RPL17P12-201ENST00000413391 526 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 RPS6P12-201ENST00000432491 726 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 RPL37P21-201ENST00000435890 276 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 COX6CP12-201ENST00000446748 202 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 SNRPGP9-201ENST00000456025 225 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 SNORD108-201ENST00000459332 71 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 HMGB1P25-201ENST00000468402 607 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AC068724.1-201ENST00000487100 792 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 SLC25A15P5-201ENST00000508033 253 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 TRAV8-5-201ENST00000537369 341 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AC090615.1-201ENST00000577519 154 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 RSL24D1P11-201ENST00000591045 491 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 PRELID3BP8-201ENST00000604148 295 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AL365503.1-201ENST00000605247 905 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AC025048.6-202ENST00000627667 438 ntBASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC33Q8N5R6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AL158163.1-201ENST00000603915 1649 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 RNA5SP258-201ENST00000362750 119 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 RNU6-263P-201ENST00000363811 107 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 Y_RNA.436-201ENST00000384097 102 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 RNU1-13P-201ENST00000384499 162 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AL022722.2-201ENST00000402519 180 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 RN7SKP142-201ENST00000411236 328 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 PGBD4P8-201ENST00000412993 562 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC096638.2-201ENST00000434965 711 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 Z95327.1-201ENST00000446082 482 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 MTCO2P7-201ENST00000446518 666 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 RPL7P52-201ENST00000449200 742 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC091153.1-201ENST00000466297 402 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AP000797.1-201ENST00000478870 387 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AP001025.2-201ENST00000490908 477 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC025445.1-201ENST00000502728 300 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC108145.1-201ENST00000503770 153 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC004069.2-201ENST00000505438 1114 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC091965.2-201ENST00000512324 613 ntBASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC33Q8N5R6 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms