Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 LINC02471-203ENST00000641941 4752 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 Y_RNA.18-201ENST00000362461 102 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 Y_RNA.560-201ENST00000384689 102 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 RPS15AP38-201ENST00000413110 372 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 TBCAP1-201ENST00000436520 327 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 RPL23AP89-201ENST00000439324 255 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 RPL39P6-201ENST00000448289 150 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC092754.2-201ENST00000463506 460 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC092757.1-201ENST00000467293 467 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 RPL7L1P8-201ENST00000469911 741 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AL139099.1-201ENST00000497398 403 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 TRMT10BP1-201ENST00000519377 943 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 MIR5684-201ENST00000585074 65 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AL031985.2-201ENST00000600955 480 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC012603.1-201ENST00000606424 528 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC135507.1-201ENST00000607214 561 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC243773.3-201ENST00000613270 256 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC073530.2-201ENST00000623987 261 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 AC007494.3-201ENST00000624660 743 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 ELL2P4-201ENST00000446870 1376 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 OR4G11P-202ENST00000642116 1414 ntBASIC4.35□□□□□ -1.71
VPS52Q8N1B4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 RNA5SP124-201ENST00000362739 110 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 Y_RNA.77-201ENST00000362962 107 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AL023807.1-201ENST00000407932 359 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 RNU6-920P-201ENST00000410926 92 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 RAC1P3-201ENST00000416129 580 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC092647.1-201ENST00000420654 287 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 Z99497.1-201ENST00000421282 135 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC093698.1-201ENST00000423843 571 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 MTND1P20-201ENST00000430341 950 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC098826.1-201ENST00000433943 471 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 MTCYBP39-201ENST00000437562 491 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 VN1R10P-201ENST00000447106 875 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 RAD23BP3-201ENST00000454157 1152 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 TRBV26-201ENST00000456572 344 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 OR9M1P-201ENST00000459641 921 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC006517.1-201ENST00000480485 328 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC117532.1-201ENST00000514638 323 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 LSM6P2-201ENST00000552208 177 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC067852.4-201ENST00000590314 478 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC084782.3-201ENST00000612282 578 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AL121772.2-201ENST00000614331 297 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC127502.3-201ENST00000636170 1206 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 CR381670.1-201ENST00000624291 1693 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms