Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 SHQ1P1-201ENST00000437111 1544 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 AL031119.1-201ENST00000404707 1879 ntBASIC5.88□□□□□ -1.47
CCDC116Q8IYX3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 IRF5P1-201ENST00000504852 2164 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 RNU1-146P-201ENST00000364015 165 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 RN7SKP237-201ENST00000364663 301 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 LCN1P2-201ENST00000372030 223 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 U3.29-201ENST00000391296 212 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 SNRPEP6-201ENST00000407465 277 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 RPSAP65-201ENST00000429660 595 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 GAPDHP27-201ENST00000447427 1020 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 KF459542.1-201ENST00000450908 553 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 AC091180.1-201ENST00000462104 372 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 AC053481.1-201ENST00000467217 306 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 KHDC1P1-201ENST00000511053 508 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 SNORA74.1-201ENST00000516320 180 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 Y_RNA.689-201ENST00000516589 107 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 MIR6813-201ENST00000621638 56 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 AC007998.5-201ENST00000622938 237 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CCDC116Q8IYX3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AC092692.1-201ENST00000623625 2595 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AC011504.1-201ENST00000623331 4103 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 Y_RNA.269-201ENST00000364685 89 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 MIR191-201ENST00000384873 92 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 RNU6-130P-201ENST00000411112 103 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 LINC00328-2P-201ENST00000436585 219 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 RPEP5-201ENST00000441137 268 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 DAP3P1-201ENST00000441522 278 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AC008481.1-201ENST00000463278 396 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 OR10G5P-201ENST00000532733 358 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AP002770.2-201ENST00000543613 532 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 MIR4273-201ENST00000582824 84 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AC006363.1-201ENST00000603806 463 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AL731566.2-201ENST00000618971 317 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AC110801.1-201ENST00000623590 212 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 AL450472.1-202ENST00000637286 180 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 SMG1P7-201ENST00000565246 2704 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 GNL2P1-201ENST00000451274 2190 ntBASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC116Q8IYX3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 RNU1-49P-201ENST00000363468 159 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms