Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB1Q86U70 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB1Q86U70 AIMP1P1-201ENST00000418670 937 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AL022400.1-201ENST00000423946 935 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB1Q86U70 TXNL1P1-201ENST00000429528 554 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 ZYG11AP1-201ENST00000430329 837 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 MTND5P25-201ENST00000430499 799 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 BMS1P19-201ENST00000433925 393 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB1Q86U70 AC005297.2-201ENST00000450430 606 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 RPL23AP35-201ENST00000451906 501 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AL445669.2-201ENST00000454425 421 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 snoU109.4-201ENST00000458953 143 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AP000873.1-201ENST00000463987 400 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 VN1R105P-201ENST00000486595 910 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AC078817.1-201ENST00000492623 435 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB1Q86U70 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LDB1Q86U70 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB1Q86U70 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB1Q86U70 RNU6-27P-201ENST00000516146 107 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 RNU6-150P-201ENST00000516237 95 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB1Q86U70 AC239860.2-201ENST00000525886 270 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LDB1Q86U70 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LDB1Q86U70 OR4P1P-201ENST00000530808 1136 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB1Q86U70 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AC091515.1-201ENST00000548110 679 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AC107016.1-201ENST00000550463 337 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 EEF1B2P4-201ENST00000551398 348 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.78□□□□□ -1.8
LDB1Q86U70 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB1Q86U70 AC090888.2-201ENST00000559765 1144 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AC053481.3-201ENST00000577881 843 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 RN7SL703P-201ENST00000578485 302 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
LDB1Q86U70 VN1R92P-201ENST00000598511 928 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AL596327.1-201ENST00000603629 213 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB1Q86U70 AC091304.6-201ENST00000619761 202 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AL607023.1-201ENST00000620045 248 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AC131159.1-201ENST00000621854 213 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AC091925.2-201ENST00000625059 256 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB1Q86U70 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB1Q86U70 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
LDB1Q86U70 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
LDB1Q86U70 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB1Q86U70 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LDB1Q86U70 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB1Q86U70 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.78□□□□□ -1.8
LDB1Q86U70 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB1Q86U70 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB1Q86U70 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LDB1Q86U70 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
LDB1Q86U70 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
LDB1Q86U70 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LDB1Q86U70 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LDB1Q86U70 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB1Q86U70 NCAPGP1-201ENST00000505112 1814 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
LDB1Q86U70 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LDB1Q86U70 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LDB1Q86U70 RNA5SP479-201ENST00000364858 117 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 RNU6-1200P-201ENST00000384162 107 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 MIR30B-201ENST00000384850 88 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LDB1Q86U70 ATP5F1P3-201ENST00000397213 657 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 AF228730.1-201ENST00000397972 663 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 AL031679.1-201ENST00000400616 525 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 PPIAP31-201ENST00000405422 495 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 HSPE1P8-201ENST00000406997 288 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 MIR1193-201ENST00000408109 78 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 MTATP6P27-201ENST00000416987 621 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 AC098592.1-201ENST00000419352 333 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 RPL7P30-201ENST00000420888 709 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 MTCO2P5-201ENST00000422621 426 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 AL513174.1-201ENST00000423182 629 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 AC019178.2-201ENST00000423595 505 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 AL035407.1-201ENST00000429211 571 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 AL590233.1-201ENST00000430017 456 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 RPS29P7-201ENST00000439662 171 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.77□□□□□ -1.81
LDB1Q86U70 AL606662.1-201ENST00000445763 553 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.77□□□□□ -1.81
LDB1Q86U70 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB1Q86U70 RPS20P32-201ENST00000456044 356 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 AC104685.1-201ENST00000502445 371 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB1Q86U70 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.77□□□□□ -1.81
LDB1Q86U70 AC093853.1-201ENST00000515689 483 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 RNU6-1129P-201ENST00000515964 104 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 RNA5SP216-201ENST00000516111 123 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 SUMO2P20-201ENST00000520803 283 ntBASIC3.77□□□□□ -1.81
LDB1Q86U70 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB1Q86U70 AC024224.1-201ENST00000538284 609 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms