Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 RPL7AP6-201ENST00000477943 801 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 RPSAP50-201ENST00000481955 852 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 RN7SL809P-201ENST00000482040 297 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AC009120.1-201ENST00000493458 473 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AC093853.1-201ENST00000515689 483 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 Y_RNA.670-201ENST00000516255 105 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AC137627.1-201ENST00000545761 289 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 MIR4433B-201ENST00000581329 102 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AC243654.2-201ENST00000612843 443 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AL049794.2-201ENST00000616301 365 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AL034546.1-201ENST00000623740 3693 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 Z95114.1-201ENST00000624264 14574 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 BDP1P-201ENST00000582658 1990 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AL592148.3-201ENST00000608771 2646 ntBASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SH3RF1Q7Z6J0 AC015799.1-201ENST00000622996 3122 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 Y_RNA.291-201ENST00000364886 113 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 Y_RNA.404-201ENST00000383978 102 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 Y_RNA.576-201ENST00000384781 102 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 COX6CP15-201ENST00000426313 211 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 CYCSP12-201ENST00000437729 300 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 SCARNA18-201ENST00000459004 134 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 RN7SL222P-201ENST00000476452 299 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 RPL32P33-201ENST00000487023 394 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 DUTP1-201ENST00000493631 470 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AL139099.1-201ENST00000497398 403 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 RPS17P5-201ENST00000498293 408 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 SLC25A15P5-201ENST00000508033 253 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 RNU6-307P-201ENST00000516743 106 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AC012400.1-201ENST00000518452 381 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AC131281.1-201ENST00000522984 164 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 FAM60DP-201ENST00000524174 632 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 HMGN2P47-201ENST00000559378 272 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AL355816.1-201ENST00000607951 118 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 DUSP12P1-201ENST00000612874 516 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AC015967.1-201ENST00000619893 476 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 GTF2IP4-201ENST00000453092 2054 ntBASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SH3RF1Q7Z6J0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 RN7SKP185-201ENST00000362813 326 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 U8.4-201ENST00000363626 134 ntBASIC6.42□□□□□ -1.38
SH3RF1Q7Z6J0 RNU6-387P-201ENST00000411331 105 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms