Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC024224.1-201ENST00000538284 609 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC135001.1-201ENST00000544546 283 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC053481.3-201ENST00000577881 843 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC087683.1-201ENST00000591187 441 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC013244.1-201ENST00000604279 193 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 MIR6780A-201ENST00000615089 68 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC073968.1-201ENST00000618594 637 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC008013.2-202ENST00000637965 364 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 CRYM-AS1-204ENST00000637983 556 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AL139811.1-201ENST00000424779 2299 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC008725.1-201ENST00000605123 2263 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 TEX21P-201ENST00000447107 1476 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 ZNF33CP-201ENST00000432492 2030 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHFQ7M4L6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHFQ7M4L6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHFQ7M4L6 RNVU1-3-201ENST00000364313 161 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 RNU6-744P-201ENST00000365557 107 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHFQ7M4L6 RNU6-1316P-201ENST00000384242 108 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 RNU6-339P-201ENST00000384310 107 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 RNU6-348P-201ENST00000384386 107 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 SNORA70E-201ENST00000384492 135 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 U3.29-201ENST00000391296 212 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 MTCO1P17-201ENST00000411522 491 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC007899.1-201ENST00000412776 775 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 TMSB10P2-201ENST00000416049 131 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC127526.1-201ENST00000417526 366 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 RPS3AP54-201ENST00000435535 734 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 CDC27P1-201ENST00000445384 715 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 RPL23AP81-201ENST00000455252 467 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 OR9M1P-201ENST00000459641 921 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AP001992.1-205ENST00000462248 379 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 RN7SL354P-201ENST00000469282 294 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC104563.1-201ENST00000476147 376 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC093677.1-201ENST00000514414 678 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 OR6C73P-201ENST00000546432 358 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHFQ7M4L6 AL391156.1-201ENST00000554965 554 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC005771.1-201ENST00000585581 349 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AL353997.4-201ENST00000586196 166 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC022916.3-201ENST00000592961 742 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC068790.6-201ENST00000602558 258 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC079089.3-201ENST00000603094 673 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC015871.2-201ENST00000603605 948 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC092354.2-201ENST00000607786 514 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC012409.3-201ENST00000611343 981 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AC091953.3-201ENST00000623220 236 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AL603839.4-201ENST00000624658 1005 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 AL392088.2-201ENST00000637607 285 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 PABPC1P7-201ENST00000413177 1513 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 RAD17P1-201ENST00000418130 2042 ntBASIC3.78□□□□□ -1.8
SHFQ7M4L6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.78□□□□□ -1.8
SHFQ7M4L6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHFQ7M4L6 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
SHFQ7M4L6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHFQ7M4L6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SHFQ7M4L6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SHFQ7M4L6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.77□□□□□ -1.81
SHFQ7M4L6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.77□□□□□ -1.81
SHFQ7M4L6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SHFQ7M4L6 RNU6-28P-201ENST00000362378 107 ntBASIC3.77□□□□□ -1.81
SHFQ7M4L6 RNU6-809P-201ENST00000384461 107 ntBASIC3.77□□□□□ -1.81
SHFQ7M4L6 SNORA3C-201ENST00000408792 125 ntBASIC3.77□□□□□ -1.81
SHFQ7M4L6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.77□□□□□ -1.81
SHFQ7M4L6 RPL36AP36-201ENST00000418616 301 ntBASIC3.77□□□□□ -1.81
SHFQ7M4L6 RPL21P32-201ENST00000419877 477 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms