Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC005539.1-201ENST00000443768 1479 ntBASIC3.86□□□□□ -1.79
USP43Q70EL4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
USP43Q70EL4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.85□□□□□ -1.79
USP43Q70EL4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP43Q70EL4 NSRP1P1-201ENST00000444067 1693 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.85□□□□□ -1.79
USP43Q70EL4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.85□□□□□ -1.79
USP43Q70EL4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.85□□□□□ -1.79
USP43Q70EL4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.85□□□□□ -1.79
USP43Q70EL4 Y_RNA.256-201ENST00000364594 104 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP43Q70EL4 Y_RNA.509-201ENST00000384506 99 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 U3.22-201ENST00000391120 215 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.85□□□□□ -1.79
USP43Q70EL4 RNU4-25P-201ENST00000410569 230 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 RN7SKP27-201ENST00000410684 333 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 TPMTP3-201ENST00000411928 735 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.85□□□□□ -1.79
USP43Q70EL4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 UQCRBP1-201ENST00000421129 336 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 GTF2IP23-201ENST00000423746 351 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP43Q70EL4 AC073069.1-201ENST00000428657 441 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 FTH1P6-201ENST00000430768 320 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AC011742.1-201ENST00000431448 434 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AC234064.1-201ENST00000436312 247 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 UBE2V1P3-201ENST00000439651 417 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 MTND5P14-201ENST00000441481 1267 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 ST13P20-201ENST00000447996 1065 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 KATNBL1P6-201ENST00000453433 915 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 RAD23BP3-201ENST00000454157 1152 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 RPL7AP52-201ENST00000458096 790 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 RPL5P24-201ENST00000463742 885 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AC013356.1-201ENST00000489027 564 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.85□□□□□ -1.79
USP43Q70EL4 BNIP3P41-201ENST00000503774 571 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AC117522.3-201ENST00000507974 584 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 AC024589.1-201ENST00000512207 263 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.85□□□□□ -1.79
USP43Q70EL4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP43Q70EL4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.85□□□□□ -1.79
USP43Q70EL4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.85□□□□□ -1.79
USP43Q70EL4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.85□□□□□ -1.79
USP43Q70EL4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
USP43Q70EL4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.85□□□□□ -1.79
USP43Q70EL4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.85□□□□□ -1.79
USP43Q70EL4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 MIR4716-201ENST00000579628 84 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP43Q70EL4 PSMA6P4-201ENST00000603247 718 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AL159169.3-201ENST00000608871 561 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 PART1_1.1-201ENST00000611761 217 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 Y_RNA.804-201ENST00000615262 101 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AC063943.3-201ENST00000615562 356 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AC011472.4-201ENST00000615848 491 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AL357080.1-201ENST00000617394 239 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 STMN1P1-201ENST00000617809 440 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AL136221.1-201ENST00000621449 509 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AL157786.1-207ENST00000627771 695 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 U3.53-201ENST00000628922 216 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AC127502.3-201ENST00000636170 1206 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 AF001550.2-201ENST00000636643 217 ntBASIC3.85□□□□□ -1.79
USP43Q70EL4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.85□□□□□ -1.79
USP43Q70EL4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP43Q70EL4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP43Q70EL4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
USP43Q70EL4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.85□□□□□ -1.79
USP43Q70EL4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP43Q70EL4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP43Q70EL4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP43Q70EL4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP43Q70EL4 ERCC6-202ENST00000374127 1782 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.84□□□□□ -1.79
USP43Q70EL4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
USP43Q70EL4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP43Q70EL4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
USP43Q70EL4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP43Q70EL4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.84□□□□□ -1.79
USP43Q70EL4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP43Q70EL4 RNU6-621P-201ENST00000364752 109 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 SNORA71.2-201ENST00000364941 134 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
USP43Q70EL4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.84□□□□□ -1.79
USP43Q70EL4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP43Q70EL4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
USP43Q70EL4 RNU6-692P-201ENST00000384496 107 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 Y_RNA.535-201ENST00000384612 99 ntBASIC3.84□□□□□ -1.79
USP43Q70EL4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
USP43Q70EL4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms