Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AC067931.1-201ENST00000624190 671 ntBASIC4.64□□□□□ -1.67
CCDC149Q6ZUS6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC149Q6ZUS6 AL158163.1-201ENST00000603915 1649 ntBASIC4.64□□□□□ -1.67
CCDC149Q6ZUS6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC149Q6ZUS6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 MIR372-201ENST00000362225 67 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 RNY4P24-201ENST00000362735 96 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 RNU6-623P-201ENST00000363143 105 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 RNU4-78P-201ENST00000410940 126 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 PGBD4P8-201ENST00000412993 562 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AIMP1P1-201ENST00000418670 937 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 Z97055.1-201ENST00000419730 712 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AL513174.1-201ENST00000423182 629 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 MTCO3P5-201ENST00000433620 714 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AC091862.1-201ENST00000438016 1100 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AL592447.1-201ENST00000447592 540 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 S100A11P1-201ENST00000477525 312 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 RN7SL132P-201ENST00000478131 296 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AC006390.1-201ENST00000508068 283 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 FABP5P5-201ENST00000515537 406 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 SETP7-201ENST00000552169 453 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 TVP23BP1-201ENST00000557500 617 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 AC087752.4-201ENST00000605911 462 ntBASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC149Q6ZUS6 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 NXPH1-205ENST00000602349 1953 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 Y_RNA.194-201ENST00000363985 102 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 RNU5E-5P-201ENST00000365379 116 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 RNU6-359P-201ENST00000365466 108 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 RNA5SP283-201ENST00000365604 119 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 MIR670-201ENST00000390142 98 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AL117339.2-201ENST00000430475 180 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 MTND1P28-201ENST00000435623 950 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 RPL23AP52-201ENST00000439311 478 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 MTCO1P19-201ENST00000443487 500 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AL645939.1-201ENST00000453429 797 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AC012170.1-201ENST00000495139 359 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 CBX3P3-201ENST00000508108 532 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 MTCO3P7-201ENST00000510008 774 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AC008958.1-201ENST00000511047 682 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 SNORA67.7-201ENST00000516664 135 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AC006362.1-201ENST00000567392 174 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 MIR5697-201ENST00000578045 78 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 MIR4286-201ENST00000580651 93 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AC103987.3-201ENST00000582071 292 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 MIR3158-1-201ENST00000583596 81 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 MIR548AB-201ENST00000584917 84 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AC091965.4-201ENST00000607691 587 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AL353600.1-201ENST00000608148 251 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC149Q6ZUS6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms