Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 AL356575.1-201ENST00000603008 283 ntBASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 AC096586.2-201ENST00000610260 441 ntBASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 AC024023.1-201ENST00000624530 922 ntBASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 Z82195.2-201ENST00000612348 18351 ntBASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 AC103988.1-201ENST00000566382 2177 ntBASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 MIR449A-201ENST00000362113 91 ntBASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 RPL31P2-201ENST00000413849 377 ntBASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 SSXP9-201ENST00000417503 292 ntBASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 USP9YP20-201ENST00000419224 558 ntBASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 AC005351.1-201ENST00000511152 786 ntBASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 AC118465.1-201ENST00000513820 1271 ntBASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 MTND5P4-201ENST00000514978 288 ntBASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 HMGB1P41-201ENST00000520234 440 ntBASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 AL160237.3-201ENST00000604114 1013 ntBASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC171Q6TFL3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 AL136164.4-201ENST00000625013 2135 ntBASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 HSPE1P1-201ENST00000421494 318 ntBASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 RPL23AP20-201ENST00000447965 421 ntBASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 KLHL2P1-201ENST00000508691 521 ntBASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 OR5AK3P-201ENST00000527486 1297 ntBASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 NRBF2P5-201ENST00000603087 788 ntBASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 GMCL1P2-201ENST00000605230 823 ntBASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 MTND4P34-201ENST00000572715 1371 ntBASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC171Q6TFL3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 MIR142-201ENST00000384835 87 ntBASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 AC080125.1-201ENST00000414888 684 ntBASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 AL096701.2-201ENST00000416920 238 ntBASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 AL160175.1-201ENST00000428124 247 ntBASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 HMGB1P12-201ENST00000438594 598 ntBASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 AC027673.1-201ENST00000456245 405 ntBASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 AC133134.1-201ENST00000466800 359 ntBASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 CKS1BP7-201ENST00000522230 235 ntBASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 AC128657.1-201ENST00000549459 145 ntBASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 AC060766.3-201ENST00000591442 263 ntBASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 AC010297.1-201ENST00000623948 149 ntBASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC171Q6TFL3 MTCO1P24-201ENST00000515438 1558 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 MIR6073-201ENST00000352083 89 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 NACA3P-201ENST00000359690 648 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 EIF5P1-201ENST00000400019 1231 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 RPL23AP15-201ENST00000450202 459 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 NPM1P13-201ENST00000452663 865 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 DNAJC19P8-201ENST00000452887 259 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 AC008280.2-201ENST00000455473 307 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 AC005912.1-201ENST00000495392 255 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 AC027807.1-201ENST00000559921 996 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 MIR5092-201ENST00000583139 88 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 RPL23AP92-201ENST00000603609 255 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 AC092608.2-201ENST00000624427 218 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 AC079228.1-201ENST00000624774 1049 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 AC092435.3-201ENST00000565538 3654 ntBASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC171Q6TFL3 RAP1BP1-201ENST00000412709 553 ntBASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 AC093084.1-201ENST00000424233 687 ntBASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 NPM1P49-201ENST00000448027 714 ntBASIC3.05□□□□□ -1.92
CCDC171Q6TFL3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms