Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC138915.3-201ENST00000562908 1389 ntBASIC3.24□□□□□ -1.89
NIPAL3Q6P499 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC107982.1-201ENST00000507171 1300 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AL359837.1-201ENST00000381357 287 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 SNRPEP2-201ENST00000397592 279 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 CYCSP45-201ENST00000402289 315 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 U3.39-201ENST00000408569 239 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 RNU2-42P-201ENST00000410697 113 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 RNU6-55P-201ENST00000411092 107 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 RNU6-954P-201ENST00000411355 107 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 RPL36AP36-201ENST00000418616 301 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC007435.1-201ENST00000421086 415 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC079780.1-201ENST00000428259 207 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 RABEPKP1-201ENST00000440529 1026 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 MTCYBP11-201ENST00000447254 1109 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 SLC31A1P1-201ENST00000451221 567 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 SSXP4-201ENST00000451349 245 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC092754.2-201ENST00000463506 460 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 RPL7L1P8-201ENST00000469911 741 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC087312.1-201ENST00000471411 480 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC007537.2-201ENST00000472093 511 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 MTCO1P49-201ENST00000523429 802 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 SNRPGP16-201ENST00000533275 226 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC011602.1-201ENST00000546484 331 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC125611.1-201ENST00000549563 229 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AL022067.1-201ENST00000602426 454 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AL606834.3-201ENST00000602615 496 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC096947.1-201ENST00000603233 470 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC006077.1-201ENST00000604746 343 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC069545.1-201ENST00000605671 358 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AL121772.2-201ENST00000614331 297 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AL355810.1-201ENST00000614629 552 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 MIR8058-201ENST00000615737 89 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC015967.1-201ENST00000619893 476 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AL161637.1-201ENST00000622380 412 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC119674.1-207ENST00000641355 633 ntBASIC3.23□□□□□ -1.89
NIPAL3Q6P499 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NIPAL3Q6P499 AC091152.2-201ENST00000591628 2569 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 MIR30E-201ENST00000362104 92 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 RNA5SP51-201ENST00000364750 119 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 RPL21P17-201ENST00000397467 475 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 OR4K6P-201ENST00000416478 897 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 OR1AA1P-201ENST00000419597 916 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 YPEL5P1-201ENST00000419731 367 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC245054.1-201ENST00000420944 258 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 PSMA6P3-201ENST00000428242 164 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 NEK4P1-201ENST00000433383 879 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 GTF2IP3-201ENST00000433887 494 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 RPL23AP74-201ENST00000437246 471 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC092427.1-201ENST00000439177 601 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 RRM2P4-201ENST00000441721 562 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC006539.3-201ENST00000454258 129 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 RFC5P1-201ENST00000454419 874 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 RPL23AP31-201ENST00000456160 467 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 RN7SL542P-201ENST00000467147 294 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 RPS27AP1-201ENST00000475545 471 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC110768.1-201ENST00000509222 400 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 AC105914.1-201ENST00000511798 226 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 RNU6-276P-201ENST00000516114 96 ntBASIC3.22□□□□□ -1.89
NIPAL3Q6P499 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NIPAL3Q6P499 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms