Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC092427.1-201ENST00000439177 601 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5□□□□□ -1.61
KRT40Q6A162 MTCO1P27-201ENST00000448269 226 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC116533.1-201ENST00000459748 321 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC069439.1-201ENST00000494739 167 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5□□□□□ -1.61
KRT40Q6A162 AC021678.1-201ENST00000505195 936 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC108078.1-201ENST00000508073 725 ntBASIC5□□□□□ -1.61
KRT40Q6A162 STMN1P2-201ENST00000508435 439 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC093809.1-201ENST00000509155 340 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5□□□□□ -1.61
KRT40Q6A162 KCTD9P2-201ENST00000512203 1013 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC018442.3-201ENST00000523025 183 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AP004247.1-201ENST00000531556 1289 ntBASIC5□□□□□ -1.61
KRT40Q6A162 OR8R1P-201ENST00000543943 764 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5□□□□□ -1.61
KRT40Q6A162 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5□□□□□ -1.61
KRT40Q6A162 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5□□□□□ -1.61
KRT40Q6A162 MIR544B-201ENST00000582372 78 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC009977.1-201ENST00000586015 570 ntBASIC5□□□□□ -1.61
KRT40Q6A162 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5□□□□□ -1.61
KRT40Q6A162 AC112187.2-201ENST00000604345 283 ntBASIC5□□□□□ -1.61
KRT40Q6A162 BCRP9-201ENST00000605312 388 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC080013.4-201ENST00000607624 649 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC008250.2-201ENST00000615261 205 ntBASIC5□□□□□ -1.61
KRT40Q6A162 AC104985.2-201ENST00000620598 500 ntBASIC5□□□□□ -1.61
KRT40Q6A162 DUXAP9-208ENST00000622815 614 ntBASIC5□□□□□ -1.61
KRT40Q6A162 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5□□□□□ -1.61
KRT40Q6A162 AC055839.1-201ENST00000634467 498 ntBASIC5□□□□□ -1.61
KRT40Q6A162 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRT40Q6A162 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
KRT40Q6A162 USP9YP4-201ENST00000424401 1745 ntBASIC5□□□□□ -1.61
KRT40Q6A162 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRT40Q6A162 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5□□□□□ -1.61
KRT40Q6A162 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRT40Q6A162 AC025125.1-201ENST00000624743 1922 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRT40Q6A162 MFSD8-242ENST00000641690 4199 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRT40Q6A162 AC006378.2-201ENST00000623178 2476 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRT40Q6A162 SPRR2C-201ENST00000290702 219 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
KRT40Q6A162 MIR372-201ENST00000362225 67 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 Y_RNA.372-201ENST00000365599 102 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT40Q6A162 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
KRT40Q6A162 RNU2-28P-201ENST00000410457 189 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 RN7SKP247-201ENST00000411094 308 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.99□□□□□ -1.61
KRT40Q6A162 RPS3AP3-201ENST00000411933 242 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 RPL23AP26-201ENST00000412728 464 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 MTATP6P27-201ENST00000416987 621 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 BX890604.2-201ENST00000427883 474 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 LSM1P1-201ENST00000438629 273 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 RPL23AP52-201ENST00000439311 478 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 GEMIN8P3-201ENST00000445417 720 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT40Q6A162 RPL39P6-201ENST00000448289 150 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT40Q6A162 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT40Q6A162 RN7SL132P-201ENST00000478131 296 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 AC041039.1-201ENST00000485656 536 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 KLRA1P-201ENST00000503499 986 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
KRT40Q6A162 AC114781.4-201ENST00000513707 639 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 AC108064.1-201ENST00000513791 460 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT40Q6A162 SNORA18.6-201ENST00000516792 115 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 MTCO2P4-201ENST00000517968 247 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 AC022878.1-201ENST00000530684 149 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.99□□□□□ -1.61
KRT40Q6A162 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT40Q6A162 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.99□□□□□ -1.61
KRT40Q6A162 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT40Q6A162 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT40Q6A162 MIR4307-201ENST00000582802 84 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 MIR4719-201ENST00000585233 84 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 AC006504.3-201ENST00000586818 523 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 BNIP3P23-201ENST00000599655 511 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 AC113403.1-201ENST00000604910 193 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 AC104458.1-201ENST00000608243 463 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 AP001506.1-201ENST00000615444 211 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 uc_338.13-201ENST00000618243 179 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 AC006338.1-201ENST00000618453 749 ntBASIC4.99□□□□□ -1.61
KRT40Q6A162 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRT40Q6A162 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
KRT40Q6A162 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
KRT40Q6A162 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.98□□□□□ -1.61
KRT40Q6A162 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRT40Q6A162 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRT40Q6A162 NOL8P1-201ENST00000508336 3529 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRT40Q6A162 OR4A15-201ENST00000314706 1035 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 RNA5SP175-201ENST00000364275 119 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 SNORA62.3-201ENST00000365110 153 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 Y_RNA.333-201ENST00000365274 102 ntBASIC4.98□□□□□ -1.61
KRT40Q6A162 RNU6-780P-201ENST00000391030 104 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms