Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 MTND5P6-201ENST00000422338 1798 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AC110491.1-201ENST00000562191 2010 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AC092473.1-201ENST00000441098 221 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 RPL23AP76-201ENST00000441860 458 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 RNU1-73P-201ENST00000383971 164 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 RPS7P9-201ENST00000414704 586 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AC126177.8-201ENST00000618339 1015 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 HMGB3P14-201ENST00000494195 599 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 OR5G4P-201ENST00000525251 760 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AC026464.5-201ENST00000562497 722 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 AC007423.1-201ENST00000605009 627 ntBASIC1.48□□□□□ -2.17
UBR4Q5T4S7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 U8.10-201ENST00000384260 133 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 BTF3P7-201ENST00000407097 488 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 MTCYBP7-201ENST00000419540 1134 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AL138785.1-201ENST00000425821 331 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 ARL4AP3-201ENST00000441452 574 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AC019159.1-201ENST00000605094 187 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 MIR96-201ENST00000362288 78 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 MIR520E-201ENST00000384867 87 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AC007064.1-201ENST00000412238 351 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AC034244.1-201ENST00000507687 207 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 SCGB1D5P-201ENST00000515134 247 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 RN7SKP209-201ENST00000516888 304 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AC008015.1-201ENST00000555505 465 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 KATNBL1P4-201ENST00000503545 918 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 EIF1P6-201ENST00000600054 334 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 MRPS35P3-201ENST00000603189 709 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AP005901.5-201ENST00000545779 1796 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 MTND5P29-201ENST00000458676 1807 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AC060773.1-201ENST00000421698 310 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 ARL6IP1P2-201ENST00000431356 563 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AL356321.1-201ENST00000621360 228 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AC008264.2-201ENST00000610193 3731 ntBASIC1.47□□□□□ -2.17
UBR4Q5T4S7 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 RPS3AP23-202ENST00000574601 686 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 OR4G1P-203ENST00000641984 1631 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 RPS12P5-201ENST00000423449 371 ntBASIC1.46□□□□□ -2.18
UBR4Q5T4S7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.46□□□□□ -2.18
UBR4Q5T4S7 AC016687.1-201ENST00000482574 353 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms