Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RNU6-660P-201ENST00000364566 109 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AL583835.1-201ENST00000399570 407 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 MTCYBP38-201ENST00000417160 1123 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 MTCO2P34-201ENST00000421994 607 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 CYCSP43-201ENST00000438233 310 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 MTND4P6-201ENST00000438297 472 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 TRIM60P18-201ENST00000441518 828 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 ARPC3P2-201ENST00000457786 533 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 RNU6-956P-201ENST00000458868 103 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC105137.1-201ENST00000484355 562 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC004069.2-201ENST00000505438 1114 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC006390.1-201ENST00000508068 283 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC109458.1-201ENST00000508858 316 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC008802.1-201ENST00000519121 791 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AP000873.5-201ENST00000533906 236 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 ZNF192P1-203ENST00000565888 810 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 MIR3611-201ENST00000584484 83 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 IPO5P1-202ENST00000600039 287 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 DEFB131E-202ENST00000602581 683 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AL020997.2-201ENST00000602607 184 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AL021997.2-201ENST00000615674 271 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 AL359715.5-201ENST00000623431 443 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
LONRF3Q496Y0 KPNA2P2-201ENST00000419546 1489 ntBASIC4.87□□□□□ -1.63
LONRF3Q496Y0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 MTND5P24-201ENST00000438892 1767 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 RPL21P132-201ENST00000331267 462 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 RN7SKP227-201ENST00000364445 330 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 SNORD6-201ENST00000365444 73 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 RNU6-648P-201ENST00000410190 107 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 PGBD4P8-201ENST00000412993 562 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AIMP1P1-201ENST00000418670 937 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 PSMA6P3-201ENST00000428242 164 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC239367.2-201ENST00000447309 705 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AL162151.2-201ENST00000448875 158 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 RN7SL98P-201ENST00000462271 300 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 RN7SL810P-201ENST00000493031 276 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 RN7SL812P-201ENST00000493791 279 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC068305.1-201ENST00000497406 726 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC006499.5-201ENST00000505037 514 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC006499.6-201ENST00000511169 607 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC010625.1-201ENST00000511296 403 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 RNU6-27P-201ENST00000516146 107 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 RN7SKP21-201ENST00000516503 220 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC022880.1-201ENST00000534017 973 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC012414.6-201ENST00000568241 401 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 RPL23AP92-201ENST00000603609 255 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 MIR432-201ENST00000606207 94 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC104073.3-201ENST00000610942 955 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC079228.1-201ENST00000624774 1049 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AC116096.1-201ENST00000566804 2314 ntBASIC4.86□□□□□ -1.63
LONRF3Q496Y0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.86□□□□□ -1.63
LONRF3Q496Y0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 191.1 ms