Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC004924.1-201ENST00000480160 781 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 HMGB1P36-201ENST00000487709 576 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC083829.1-201ENST00000503756 657 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC093840.1-201ENST00000511599 336 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC011352.1-201ENST00000512300 793 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 RNU6-201P-201ENST00000517100 61 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC090151.1-201ENST00000520784 730 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 EEF1B2P4-201ENST00000551398 348 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC068831.4-201ENST00000556118 109 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC090615.1-201ENST00000577519 154 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 MIR4801-201ENST00000582704 82 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 SLC25A36P1-201ENST00000590111 465 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AL355812.1-201ENST00000603215 216 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC233280.2-201ENST00000603917 1070 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC068944.2-201ENST00000610373 403 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC073534.2-201ENST00000620377 381 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 BMS1P21-201ENST00000634565 365 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 MIR4496-201ENST00000635896 61 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC093536.2-201ENST00000565257 1406 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC087190.4-201ENST00000574616 8334 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 EIF2AP4-201ENST00000424793 1781 ntBASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD3Q3KNS1 AC027290.2-201ENST00000623210 18662 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 FRG1BP-201ENST00000278882 761 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 OR52B1P-201ENST00000316506 909 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC068538.1-201ENST00000376856 336 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 RNU1-44P-201ENST00000384453 163 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 RNA5SP146-201ENST00000410743 123 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 RN7SL41P-201ENST00000476144 297 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC109927.2-201ENST00000506416 303 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 RNU6-506P-201ENST00000516553 94 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 RNA5SP360-201ENST00000516555 118 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 SNORA18.6-201ENST00000516792 115 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 OR4G1P-201ENST00000588632 938 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC020634.1-201ENST00000608701 549 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC007684.1-201ENST00000609671 477 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC012409.3-201ENST00000611343 981 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC009237.17-201ENST00000618111 748 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 OR5AK4P-201ENST00000635912 903 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 AC017104.4-201ENST00000636283 1592 ntBASIC4.34□□□□□ -1.71
PTCHD3Q3KNS1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.34□□□□□ -1.72
PTCHD3Q3KNS1 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.34□□□□□ -1.72
PTCHD3Q3KNS1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.34□□□□□ -1.72
PTCHD3Q3KNS1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.34□□□□□ -1.72
PTCHD3Q3KNS1 MAPK10-304ENST00000641341 3984 ntBASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 AL592437.2-201ENST00000421655 2434 ntBASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 ZNF33CP-201ENST00000432492 2030 ntBASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 AC091046.3-201ENST00000631455 1574 ntBASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 ZNF734P-201ENST00000419494 1534 ntBASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 RNA5SP372-201ENST00000390836 115 ntBASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 AL049693.1-201ENST00000402760 611 ntBASIC4.33□□□□□ -1.72
PTCHD3Q3KNS1 AC009237.10-201ENST00000414112 510 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms