Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.95□□□□□ -1.78
PTCH1Q13635 AC125238.1-201ENST00000448842 249 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.95□□□□□ -1.78
PTCH1Q13635 RPL37P6-202ENST00000464216 403 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.95□□□□□ -1.78
PTCH1Q13635 ANXA2P1-201ENST00000505539 926 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AC109329.2-201ENST00000519658 482 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.95□□□□□ -1.78
PTCH1Q13635 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTCH1Q13635 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.95□□□□□ -1.78
PTCH1Q13635 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.95□□□□□ -1.78
PTCH1Q13635 CENPUP2-201ENST00000555897 1186 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AC079089.3-201ENST00000603094 673 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AL139286.1-201ENST00000604465 483 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AC113194.1-201ENST00000606037 500 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AC020658.4-201ENST00000613987 684 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 MIR1264-201ENST00000616374 69 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AC004943.3-201ENST00000624116 600 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTCH1Q13635 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTCH1Q13635 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTCH1Q13635 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PTCH1Q13635 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
PTCH1Q13635 AC107081.3-201ENST00000612715 2034 ntBASIC3.94□□□□□ -1.78
PTCH1Q13635 RNU6-356P-201ENST00000384140 107 ntBASIC3.94□□□□□ -1.78
PTCH1Q13635 SNORA46-201ENST00000384762 135 ntBASIC3.94□□□□□ -1.78
PTCH1Q13635 AL513321.1-201ENST00000441175 761 ntBASIC3.94□□□□□ -1.78
PTCH1Q13635 HMGB1P48-201ENST00000446155 598 ntBASIC3.94□□□□□ -1.78
PTCH1Q13635 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.94□□□□□ -1.78
PTCH1Q13635 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.94□□□□□ -1.78
PTCH1Q13635 AC106872.2-201ENST00000494303 480 ntBASIC3.94□□□□□ -1.78
PTCH1Q13635 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.94□□□□□ -1.78
PTCH1Q13635 TXNP6-201ENST00000510190 310 ntBASIC3.94□□□□□ -1.78
PTCH1Q13635 AC008837.1-201ENST00000511513 412 ntBASIC3.94□□□□□ -1.78
PTCH1Q13635 SNORD53-201ENST00000579969 78 ntBASIC3.94□□□□□ -1.78
PTCH1Q13635 AC004775.1-201ENST00000607389 753 ntBASIC3.94□□□□□ -1.78
PTCH1Q13635 AC083865.1-201ENST00000636634 831 ntBASIC3.94□□□□□ -1.78
PTCH1Q13635 U6.107-201ENST00000637108 79 ntBASIC3.94□□□□□ -1.78
PTCH1Q13635 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.94□□□□□ -1.78
PTCH1Q13635 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTCH1Q13635 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTCH1Q13635 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.93□□□□□ -1.78
PTCH1Q13635 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTCH1Q13635 SNORA70E-201ENST00000384492 135 ntBASIC3.93□□□□□ -1.78
PTCH1Q13635 RAP1BP1-201ENST00000412709 553 ntBASIC3.93□□□□□ -1.78
PTCH1Q13635 RPL32P35-201ENST00000415214 394 ntBASIC3.93□□□□□ -1.78
PTCH1Q13635 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.93□□□□□ -1.78
PTCH1Q13635 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.93□□□□□ -1.78
PTCH1Q13635 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.93□□□□□ -1.78
PTCH1Q13635 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.93□□□□□ -1.78
PTCH1Q13635 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.93□□□□□ -1.78
PTCH1Q13635 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.93□□□□□ -1.78
PTCH1Q13635 AC008494.2-201ENST00000514544 370 ntBASIC3.93□□□□□ -1.78
PTCH1Q13635 AC103833.1-201ENST00000517442 172 ntBASIC3.93□□□□□ -1.78
PTCH1Q13635 AC068657.1-201ENST00000520807 306 ntBASIC3.93□□□□□ -1.78
PTCH1Q13635 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.93□□□□□ -1.78
PTCH1Q13635 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.93□□□□□ -1.78
PTCH1Q13635 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.93□□□□□ -1.78
PTCH1Q13635 AC091515.1-201ENST00000548110 679 ntBASIC3.93□□□□□ -1.78
PTCH1Q13635 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.93□□□□□ -1.78
PTCH1Q13635 MIR4644-201ENST00000579929 84 ntBASIC3.93□□□□□ -1.78
PTCH1Q13635 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.93□□□□□ -1.78
PTCH1Q13635 AC090312.2-201ENST00000582687 378 ntBASIC3.93□□□□□ -1.78
PTCH1Q13635 AC135178.6-201ENST00000605314 398 ntBASIC3.93□□□□□ -1.78
PTCH1Q13635 AC012467.1-201ENST00000607740 256 ntBASIC3.93□□□□□ -1.78
PTCH1Q13635 MIR6817-201ENST00000615588 66 ntBASIC3.93□□□□□ -1.78
PTCH1Q13635 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.93□□□□□ -1.78
PTCH1Q13635 XPOTP1-201ENST00000443317 2398 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTCH1Q13635 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTCH1Q13635 U8.2-201ENST00000363156 134 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTCH1Q13635 MTND3P20-201ENST00000407663 186 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 SNORA3.2-201ENST00000408221 125 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 NUP35P2-201ENST00000416748 943 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.92□□□□□ -1.78
PTCH1Q13635 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PTCH1Q13635 ZFAND6P1-201ENST00000434138 605 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 USP9YP7-201ENST00000436723 430 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 RPS27P5-201ENST00000444247 244 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.92□□□□□ -1.78
PTCH1Q13635 USP9YP32-201ENST00000452432 430 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 HMGB3P30-201ENST00000457863 606 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 RPL21P71-201ENST00000465598 459 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 AC104689.1-201ENST00000473356 768 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 AC093278.1-201ENST00000494700 600 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 RNU6-991P-201ENST00000516168 107 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 RN7SKP96-201ENST00000516948 297 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.92□□□□□ -1.78
PTCH1Q13635 C1DP5-201ENST00000525775 383 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 SERPINE4P-201ENST00000554978 281 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.92□□□□□ -1.78
PTCH1Q13635 RNA5SP108-201ENST00000605921 117 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PTCH1Q13635 MIR4496-201ENST00000635896 61 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 MIR7153-201ENST00000637758 57 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.92□□□□□ -1.78
PTCH1Q13635 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.92□□□□□ -1.78
PTCH1Q13635 NSRP1P1-201ENST00000444067 1693 ntBASIC3.92□□□□□ -1.78
PTCH1Q13635 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms